Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGA11Q9Y5H2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA11Q9Y5H2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PCDHGA11Q9Y5H2 Z82202.1-201ENST00000623446 1880 ntBASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 POM121L13P-201ENST00000422362 380 ntBASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA11Q9Y5H2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGA11Q9Y5H2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGA11Q9Y5H2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.77■□□□□ 0.59
PCDHGA11Q9Y5H2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 LETM1P2-201ENST00000597330 2178 ntBASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PCDHGA11Q9Y5H2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms