Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB11Q9Y5F2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 YBX1P10-201ENST00000444752 975 ntBASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 AC073195.1-201ENST00000607241 877 ntBASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB11Q9Y5F2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 FAM197Y1-201ENST00000421178 764 ntBASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 AL353708.3-201ENST00000610272 989 ntBASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
PCDHB11Q9Y5F2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB11Q9Y5F2 AP002982.1-201ENST00000492365 877 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms