Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.58■■□□□ 1.05
BLOC1S4Q9NUP1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
BLOC1S4Q9NUP1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BLOC1S4Q9NUP1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BLOC1S4Q9NUP1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BLOC1S4Q9NUP1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BLOC1S4Q9NUP1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BLOC1S4Q9NUP1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
BLOC1S4Q9NUP1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BLOC1S4Q9NUP1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BLOC1S4Q9NUP1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.58■■□□□ 1.05
BLOC1S4Q9NUP1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.58■■□□□ 1.05
BLOC1S4Q9NUP1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
BLOC1S4Q9NUP1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.58■■□□□ 1.04
BLOC1S4Q9NUP1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
BLOC1S4Q9NUP1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
BLOC1S4Q9NUP1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.58■■□□□ 1.04
BLOC1S4Q9NUP1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
BLOC1S4Q9NUP1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
BLOC1S4Q9NUP1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
BLOC1S4Q9NUP1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.58■■□□□ 1.04
BLOC1S4Q9NUP1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
BLOC1S4Q9NUP1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 HTR7P1-201ENST00000538670 1336 ntBASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 AC142381.4-202ENST00000563973 229 ntBASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.57■■□□□ 1.04
BLOC1S4Q9NUP1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
BLOC1S4Q9NUP1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 AC141586.3-201ENST00000562166 1838 ntBASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 AL353708.3-201ENST00000610272 989 ntBASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.55■■□□□ 1.04
BLOC1S4Q9NUP1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 NIFKP9-201ENST00000419265 221 ntBASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
BLOC1S4Q9NUP1 RPS2P4-201ENST00000476944 856 ntBASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms