Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.75■■□□□ 1.07
PDLIM7Q9NR12 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PDLIM7Q9NR12 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM7Q9NR12 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.74■■□□□ 1.07
PDLIM7Q9NR12 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM7Q9NR12 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM7Q9NR12 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PDLIM7Q9NR12 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
PDLIM7Q9NR12 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.74■■□□□ 1.07
PDLIM7Q9NR12 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM7Q9NR12 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.74■■□□□ 1.07
PDLIM7Q9NR12 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.74■■□□□ 1.07
PDLIM7Q9NR12 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.74■■□□□ 1.07
PDLIM7Q9NR12 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM7Q9NR12 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.74■■□□□ 1.07
PDLIM7Q9NR12 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.74■■□□□ 1.07
PDLIM7Q9NR12 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM7Q9NR12 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM7Q9NR12 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.74■■□□□ 1.07
PDLIM7Q9NR12 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 CCR12P-201ENST00000446203 998 ntBASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 AC011558.1-201ENST00000623459 338 ntBASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 RCC2P6-201ENST00000526625 1557 ntBASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PDLIM7Q9NR12 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDLIM7Q9NR12 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.72■■□□□ 1.07
PDLIM7Q9NR12 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.72■■□□□ 1.07
PDLIM7Q9NR12 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
PDLIM7Q9NR12 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDLIM7Q9NR12 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDLIM7Q9NR12 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDLIM7Q9NR12 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDLIM7Q9NR12 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.72■■□□□ 1.07
PDLIM7Q9NR12 MFAP1P1-201ENST00000442257 1255 ntBASIC21.72■■□□□ 1.07
PDLIM7Q9NR12 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDLIM7Q9NR12 AC008040.2-201ENST00000461049 708 ntBASIC21.72■■□□□ 1.07
PDLIM7Q9NR12 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.72■■□□□ 1.07
PDLIM7Q9NR12 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.72■■□□□ 1.07
PDLIM7Q9NR12 AC011298.2-201ENST00000617989 482 ntBASIC21.72■■□□□ 1.07
PDLIM7Q9NR12 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDLIM7Q9NR12 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDLIM7Q9NR12 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDLIM7Q9NR12 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 TUBB8P6-201ENST00000436895 1288 ntBASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 AC007663.1-201ENST00000438948 1240 ntBASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 AC141257.4-201ENST00000634557 245 ntBASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 AC136944.6-201ENST00000634818 245 ntBASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms