Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 MYC-209ENST00000641252 345 ntBASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 AC006970.2-201ENST00000450065 779 ntBASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB1Q9H4B7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 AP006587.1-201ENST00000534129 1502 ntBASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 TSPY6P-201ENST00000448518 926 ntBASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 AC120498.9-201ENST00000339021 3867 ntBASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 KRT8P8-201ENST00000434750 1448 ntBASIC18.66■□□□□ 0.58
TUBB1Q9H4B7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 AC092368.3-202ENST00000574180 1591 ntBASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 AC104581.1-202ENST00000635932 2618 ntBASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 NCF1B-203ENST00000435988 1254 ntBASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 YBX1P10-201ENST00000444752 975 ntBASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBB1Q9H4B7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.64■□□□□ 0.58
TUBB1Q9H4B7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms