Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 NOC2LP1-202ENST00000452600 2235 ntBASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC9.83□□□□□ -0.84
KRTAP3-1Q9BYR8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 KRT17P1-201ENST00000399211 1546 ntBASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 AC011767.1-201ENST00000617410 1153 ntBASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 EFTUD1P1-204ENST00000560401 1798 ntBASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 AC104417.2-201ENST00000562989 1793 ntBASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP3-1Q9BYR8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 KRT18P11-201ENST00000435214 1283 ntBASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC9.81□□□□□ -0.84
KRTAP3-1Q9BYR8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC9.81□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms