Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RPAP1Q9BWH6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 YBX1P10-201ENST00000444752 975 ntBASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 KRT18P35-201ENST00000510488 1269 ntBASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 NAPSB-206ENST00000562112 1266 ntBASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 AC010947.1-201ENST00000623454 693 ntBASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPAP1Q9BWH6 AP006587.1-201ENST00000534129 1502 ntBASIC23.54■■□□□ 1.36
RPAP1Q9BWH6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RPAP1Q9BWH6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RPAP1Q9BWH6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RPAP1Q9BWH6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.54■■□□□ 1.36
RPAP1Q9BWH6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
RPAP1Q9BWH6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.54■■□□□ 1.36
RPAP1Q9BWH6 AL445675.2-201ENST00000620291 557 ntBASIC23.54■■□□□ 1.36
RPAP1Q9BWH6 LINC01568-207ENST00000641790 1380 ntBASIC23.54■■□□□ 1.36
RPAP1Q9BWH6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
RPAP1Q9BWH6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.54■■□□□ 1.36
RPAP1Q9BWH6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RPAP1Q9BWH6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
RPAP1Q9BWH6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RPAP1Q9BWH6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
RPAP1Q9BWH6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RPAP1Q9BWH6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RPAP1Q9BWH6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
RPAP1Q9BWH6 AC005521.1-201ENST00000393351 872 ntBASIC23.53■■□□□ 1.36
RPAP1Q9BWH6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.53■■□□□ 1.36
RPAP1Q9BWH6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RPAP1Q9BWH6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC23.53■■□□□ 1.36
RPAP1Q9BWH6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.53■■□□□ 1.36
RPAP1Q9BWH6 CYP2D8P-201ENST00000433633 1490 ntBASIC23.53■■□□□ 1.36
RPAP1Q9BWH6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RPAP1Q9BWH6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RPAP1Q9BWH6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RPAP1Q9BWH6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.53■■□□□ 1.36
RPAP1Q9BWH6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
RPAP1Q9BWH6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RPAP1Q9BWH6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.53■■□□□ 1.36
RPAP1Q9BWH6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
RPAP1Q9BWH6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
RPAP1Q9BWH6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RPAP1Q9BWH6 TERF1P1-201ENST00000311003 1181 ntBASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 MESTP1-201ENST00000404287 994 ntBASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 DGCR10-201ENST00000609839 495 ntBASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.52■■□□□ 1.36
RPAP1Q9BWH6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms