Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
GFI1Q99684 CYP2T1P-201ENST00000432607 1285 ntBASIC16.73■□□□□ 0.27
GFI1Q99684 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.73■□□□□ 0.27
GFI1Q99684 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.73■□□□□ 0.27
GFI1Q99684 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.73■□□□□ 0.27
GFI1Q99684 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.73■□□□□ 0.27
GFI1Q99684 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.73■□□□□ 0.27
GFI1Q99684 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFI1Q99684 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFI1Q99684 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFI1Q99684 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
GFI1Q99684 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.73■□□□□ 0.27
GFI1Q99684 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFI1Q99684 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.73■□□□□ 0.27
GFI1Q99684 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
GFI1Q99684 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GFI1Q99684 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFI1Q99684 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.72■□□□□ 0.27
GFI1Q99684 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFI1Q99684 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFI1Q99684 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.72■□□□□ 0.27
GFI1Q99684 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFI1Q99684 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFI1Q99684 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.72■□□□□ 0.27
GFI1Q99684 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
GFI1Q99684 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFI1Q99684 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GFI1Q99684 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFI1Q99684 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFI1Q99684 ZNRF2P3-201ENST00000424200 374 ntBASIC16.72■□□□□ 0.27
GFI1Q99684 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.72■□□□□ 0.27
GFI1Q99684 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.72■□□□□ 0.27
GFI1Q99684 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.72■□□□□ 0.27
GFI1Q99684 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.72■□□□□ 0.27
GFI1Q99684 AC068880.1-201ENST00000507289 2297 ntBASIC16.72■□□□□ 0.27
GFI1Q99684 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFI1Q99684 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFI1Q99684 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFI1Q99684 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.72■□□□□ 0.27
GFI1Q99684 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.72■□□□□ 0.27
GFI1Q99684 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
GFI1Q99684 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.71■□□□□ 0.27
GFI1Q99684 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFI1Q99684 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFI1Q99684 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.71■□□□□ 0.27
GFI1Q99684 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFI1Q99684 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFI1Q99684 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.71■□□□□ 0.27
GFI1Q99684 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFI1Q99684 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.71■□□□□ 0.27
GFI1Q99684 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFI1Q99684 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFI1Q99684 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
GFI1Q99684 KRT18P11-201ENST00000435214 1283 ntBASIC16.71■□□□□ 0.27
GFI1Q99684 AL589743.5-201ENST00000616611 1050 ntBASIC16.71■□□□□ 0.27
GFI1Q99684 AC011767.1-201ENST00000617410 1153 ntBASIC16.71■□□□□ 0.27
GFI1Q99684 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.71■□□□□ 0.27
GFI1Q99684 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
GFI1Q99684 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFI1Q99684 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GFI1Q99684 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GFI1Q99684 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.71■□□□□ 0.27
GFI1Q99684 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
GFI1Q99684 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GFI1Q99684 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFI1Q99684 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
GFI1Q99684 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GFI1Q99684 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GFI1Q99684 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.71■□□□□ 0.27
GFI1Q99684 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
GFI1Q99684 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GFI1Q99684 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GFI1Q99684 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
GFI1Q99684 AC010980.2-201ENST00000587099 1412 ntBASIC16.7■□□□□ 0.26
GFI1Q99684 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GFI1Q99684 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GFI1Q99684 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GFI1Q99684 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
GFI1Q99684 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GFI1Q99684 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GFI1Q99684 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GFI1Q99684 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GFI1Q99684 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GFI1Q99684 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GFI1Q99684 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
GFI1Q99684 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GFI1Q99684 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.7■□□□□ 0.26
GFI1Q99684 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.7■□□□□ 0.26
GFI1Q99684 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GFI1Q99684 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.7■□□□□ 0.26
GFI1Q99684 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
GFI1Q99684 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GFI1Q99684 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GFI1Q99684 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.7■□□□□ 0.26
GFI1Q99684 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GFI1Q99684 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.7■□□□□ 0.26
GFI1Q99684 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.7■□□□□ 0.26
GFI1Q99684 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GFI1Q99684 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.7■□□□□ 0.26
GFI1Q99684 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms