Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC38A3Q99624 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SLC38A3Q99624 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC38A3Q99624 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC38A3Q99624 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SLC38A3Q99624 AC099778.1-201ENST00000568593 1911 ntBASIC18.78■□□□□ 0.6
SLC38A3Q99624 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SLC38A3Q99624 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A3Q99624 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A3Q99624 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SLC38A3Q99624 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A3Q99624 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SLC38A3Q99624 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC38A3Q99624 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC38A3Q99624 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC38A3Q99624 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SLC38A3Q99624 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A3Q99624 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A3Q99624 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SLC38A3Q99624 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A3Q99624 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC38A3Q99624 AC005521.1-201ENST00000393351 872 ntBASIC18.77■□□□□ 0.6
SLC38A3Q99624 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC38A3Q99624 AC113347.1-201ENST00000413321 391 ntBASIC18.77■□□□□ 0.6
SLC38A3Q99624 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC38A3Q99624 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC38A3Q99624 AL137013.1-201ENST00000432946 1228 ntBASIC18.77■□□□□ 0.6
SLC38A3Q99624 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.77■□□□□ 0.6
SLC38A3Q99624 AC008040.2-201ENST00000461049 708 ntBASIC18.77■□□□□ 0.6
SLC38A3Q99624 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC38A3Q99624 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.77■□□□□ 0.6
SLC38A3Q99624 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC38A3Q99624 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
SLC38A3Q99624 LINC01006-201ENST00000333319 2292 ntBASIC18.77■□□□□ 0.6
SLC38A3Q99624 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A3Q99624 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC38A3Q99624 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC38A3Q99624 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.77■□□□□ 0.59
SLC38A3Q99624 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC38A3Q99624 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC38A3Q99624 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.77■□□□□ 0.59
SLC38A3Q99624 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC38A3Q99624 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC38A3Q99624 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC38A3Q99624 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A3Q99624 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SLC38A3Q99624 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A3Q99624 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SLC38A3Q99624 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A3Q99624 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC38A3Q99624 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A3Q99624 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A3Q99624 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A3Q99624 AC091390.4-202ENST00000476426 537 ntBASIC18.76■□□□□ 0.59
SLC38A3Q99624 AC128688.1-201ENST00000487626 519 ntBASIC18.76■□□□□ 0.59
SLC38A3Q99624 Z85996.1-201ENST00000494644 937 ntBASIC18.76■□□□□ 0.59
SLC38A3Q99624 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC38A3Q99624 EGLN1P1-201ENST00000531623 762 ntBASIC18.76■□□□□ 0.59
SLC38A3Q99624 AC092865.7-201ENST00000641832 219 ntBASIC18.76■□□□□ 0.59
SLC38A3Q99624 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SLC38A3Q99624 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A3Q99624 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SLC38A3Q99624 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A3Q99624 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC38A3Q99624 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A3Q99624 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A3Q99624 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC38A3Q99624 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A3Q99624 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC38A3Q99624 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC38A3Q99624 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A3Q99624 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A3Q99624 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A3Q99624 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A3Q99624 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A3Q99624 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A3Q99624 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SLC38A3Q99624 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC38A3Q99624 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A3Q99624 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A3Q99624 MFAP1P1-201ENST00000442257 1255 ntBASIC18.75■□□□□ 0.59
SLC38A3Q99624 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.75■□□□□ 0.59
SLC38A3Q99624 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.75■□□□□ 0.59
SLC38A3Q99624 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC38A3Q99624 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A3Q99624 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SLC38A3Q99624 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A3Q99624 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SLC38A3Q99624 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A3Q99624 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SLC38A3Q99624 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC38A3Q99624 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC38A3Q99624 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SLC38A3Q99624 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC38A3Q99624 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SLC38A3Q99624 LINC01465-201ENST00000408887 1940 ntBASIC18.74■□□□□ 0.59
SLC38A3Q99624 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A3Q99624 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A3Q99624 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A3Q99624 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms