Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 CYP2T1P-201ENST00000432607 1285 ntBASIC18.43■□□□□ 0.54
LRRC58Q96CX6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 AC137761.2-201ENST00000561729 223 ntBASIC18.43■□□□□ 0.54
LRRC58Q96CX6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 AC145350.3-201ENST00000569033 163 ntBASIC18.43■□□□□ 0.54
LRRC58Q96CX6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 AC090164.3-201ENST00000610780 2143 ntBASIC18.43■□□□□ 0.54
LRRC58Q96CX6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 TFP1-202ENST00000475455 1573 ntBASIC18.42■□□□□ 0.54
LRRC58Q96CX6 AC093525.10-201ENST00000625130 1569 ntBASIC18.42■□□□□ 0.54
LRRC58Q96CX6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 AC034268.1-201ENST00000441047 882 ntBASIC18.42■□□□□ 0.54
LRRC58Q96CX6 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 AC008694.1-202ENST00000636953 945 ntBASIC18.42■□□□□ 0.54
LRRC58Q96CX6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 Z98044.1-201ENST00000632503 1764 ntBASIC18.42■□□□□ 0.54
LRRC58Q96CX6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC58Q96CX6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 AC010980.2-201ENST00000587099 1412 ntBASIC18.41■□□□□ 0.54
LRRC58Q96CX6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 MIR5787-201ENST00000611784 55 ntBASIC18.41■□□□□ 0.54
LRRC58Q96CX6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC58Q96CX6 FP475955.4-201ENST00000623131 1990 ntBASIC18.41■□□□□ 0.54
LRRC58Q96CX6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC58Q96CX6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRC58Q96CX6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms