Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF4Q92544 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF4Q92544 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF4Q92544 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF4Q92544 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF4Q92544 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF4Q92544 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF4Q92544 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.29■□□□□ 0.52
TM9SF4Q92544 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF4Q92544 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF4Q92544 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF4Q92544 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.29■□□□□ 0.52
TM9SF4Q92544 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TM9SF4Q92544 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF4Q92544 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TM9SF4Q92544 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF4Q92544 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.29■□□□□ 0.52
TM9SF4Q92544 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF4Q92544 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.29■□□□□ 0.52
TM9SF4Q92544 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TM9SF4Q92544 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF4Q92544 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.28■□□□□ 0.52
TM9SF4Q92544 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF4Q92544 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.28■□□□□ 0.52
TM9SF4Q92544 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF4Q92544 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.28■□□□□ 0.52
TM9SF4Q92544 AC018445.3-201ENST00000624177 1945 ntBASIC18.28■□□□□ 0.52
TM9SF4Q92544 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.28■□□□□ 0.52
TM9SF4Q92544 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF4Q92544 TMPOP1-202ENST00000424642 1267 ntBASIC18.28■□□□□ 0.52
TM9SF4Q92544 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.28■□□□□ 0.52
TM9SF4Q92544 KSR1P1-201ENST00000446298 240 ntBASIC18.28■□□□□ 0.52
TM9SF4Q92544 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.28■□□□□ 0.52
TM9SF4Q92544 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF4Q92544 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.28■□□□□ 0.52
TM9SF4Q92544 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF4Q92544 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF4Q92544 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF4Q92544 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF4Q92544 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF4Q92544 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
TM9SF4Q92544 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TM9SF4Q92544 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF4Q92544 AC098818.2-201ENST00000564925 2320 ntBASIC18.28■□□□□ 0.52
TM9SF4Q92544 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF4Q92544 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF4Q92544 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF4Q92544 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF4Q92544 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF4Q92544 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF4Q92544 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.27■□□□□ 0.52
TM9SF4Q92544 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.27■□□□□ 0.52
TM9SF4Q92544 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.27■□□□□ 0.52
TM9SF4Q92544 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF4Q92544 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF4Q92544 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
TM9SF4Q92544 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.27■□□□□ 0.52
TM9SF4Q92544 RCN1P1-201ENST00000400413 996 ntBASIC18.27■□□□□ 0.52
TM9SF4Q92544 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.27■□□□□ 0.52
TM9SF4Q92544 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.27■□□□□ 0.52
TM9SF4Q92544 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.27■□□□□ 0.52
TM9SF4Q92544 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TM9SF4Q92544 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TM9SF4Q92544 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.27■□□□□ 0.52
TM9SF4Q92544 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF4Q92544 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM9SF4Q92544 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TM9SF4Q92544 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
TM9SF4Q92544 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
TM9SF4Q92544 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
TM9SF4Q92544 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF4Q92544 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF4Q92544 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF4Q92544 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
TM9SF4Q92544 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.26■□□□□ 0.51
TM9SF4Q92544 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF4Q92544 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF4Q92544 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF4Q92544 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.26■□□□□ 0.51
TM9SF4Q92544 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF4Q92544 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF4Q92544 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF4Q92544 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF4Q92544 RBM17P1-201ENST00000453646 1190 ntBASIC18.26■□□□□ 0.51
TM9SF4Q92544 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.26■□□□□ 0.51
TM9SF4Q92544 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF4Q92544 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.26■□□□□ 0.51
TM9SF4Q92544 AC145285.6-201ENST00000604632 637 ntBASIC18.26■□□□□ 0.51
TM9SF4Q92544 AC005363.2-201ENST00000618631 242 ntBASIC18.26■□□□□ 0.51
TM9SF4Q92544 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.26■□□□□ 0.51
TM9SF4Q92544 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF4Q92544 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF4Q92544 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.26■□□□□ 0.51
TM9SF4Q92544 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF4Q92544 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF4Q92544 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.26■□□□□ 0.51
TM9SF4Q92544 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM9SF4Q92544 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TM9SF4Q92544 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TM9SF4Q92544 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms