Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CKAP2Q8WWK9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.28■□□□□ 0.68
CKAP2Q8WWK9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CKAP2Q8WWK9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
CKAP2Q8WWK9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CKAP2Q8WWK9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.27■□□□□ 0.68
CKAP2Q8WWK9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CKAP2Q8WWK9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CKAP2Q8WWK9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CKAP2Q8WWK9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CKAP2Q8WWK9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
CKAP2Q8WWK9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CKAP2Q8WWK9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.27■□□□□ 0.68
CKAP2Q8WWK9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CKAP2Q8WWK9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CKAP2Q8WWK9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CKAP2Q8WWK9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.27■□□□□ 0.68
CKAP2Q8WWK9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CKAP2Q8WWK9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CKAP2Q8WWK9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CKAP2Q8WWK9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 AC005837.3-201ENST00000612163 286 ntBASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CKAP2Q8WWK9 ZNF815P-204ENST00000434898 1737 ntBASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 LINC02228-203ENST00000641970 1355 ntBASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 AC027612.3-201ENST00000413684 1047 ntBASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 AL591742.1-201ENST00000604433 565 ntBASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.25■□□□□ 0.67
CKAP2Q8WWK9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CKAP2Q8WWK9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms