Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.19■□□□□ 0.82
TRAF3IP1Q8TDR0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 ID1-201ENST00000376105 1233 ntBASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAF3IP1Q8TDR0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 UNC93B4-201ENST00000505679 747 ntBASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 AL121829.2-201ENST00000620908 328 ntBASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAF3IP1Q8TDR0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAF3IP1Q8TDR0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAF3IP1Q8TDR0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAF3IP1Q8TDR0 AC018445.3-201ENST00000624177 1945 ntBASIC20.16■□□□□ 0.82
TRAF3IP1Q8TDR0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.16■□□□□ 0.82
TRAF3IP1Q8TDR0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAF3IP1Q8TDR0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAF3IP1Q8TDR0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAF3IP1Q8TDR0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAF3IP1Q8TDR0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRAF3IP1Q8TDR0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRAF3IP1Q8TDR0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAF3IP1Q8TDR0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAF3IP1Q8TDR0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
TRAF3IP1Q8TDR0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAF3IP1Q8TDR0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
TRAF3IP1Q8TDR0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TRAF3IP1Q8TDR0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.14■□□□□ 0.82
TRAF3IP1Q8TDR0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TRAF3IP1Q8TDR0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.14■□□□□ 0.81
TRAF3IP1Q8TDR0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms