Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CFAP61Q8NHU2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CFAP61Q8NHU2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CFAP61Q8NHU2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CFAP61Q8NHU2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CFAP61Q8NHU2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CFAP61Q8NHU2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CFAP61Q8NHU2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CFAP61Q8NHU2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.58■□□□□ 0.73
CFAP61Q8NHU2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.58■□□□□ 0.73
CFAP61Q8NHU2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CFAP61Q8NHU2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CFAP61Q8NHU2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CFAP61Q8NHU2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CFAP61Q8NHU2 HLA-G-202ENST00000376815 851 ntBASIC19.58■□□□□ 0.72
CFAP61Q8NHU2 HLA-G-203ENST00000376818 1127 ntBASIC19.58■□□□□ 0.72
CFAP61Q8NHU2 RNA5SP413-201ENST00000516373 109 ntBASIC19.58■□□□□ 0.72
CFAP61Q8NHU2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CFAP61Q8NHU2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.58■□□□□ 0.72
CFAP61Q8NHU2 AL031963.3-201ENST00000606441 850 ntBASIC19.58■□□□□ 0.72
CFAP61Q8NHU2 AC006557.6-201ENST00000623071 864 ntBASIC19.58■□□□□ 0.72
CFAP61Q8NHU2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.58■□□□□ 0.72
CFAP61Q8NHU2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CFAP61Q8NHU2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CFAP61Q8NHU2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CFAP61Q8NHU2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CFAP61Q8NHU2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CFAP61Q8NHU2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.58■□□□□ 0.72
CFAP61Q8NHU2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.58■□□□□ 0.72
CFAP61Q8NHU2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CFAP61Q8NHU2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 AL390719.1-204ENST00000412397 1219 ntBASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP61Q8NHU2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 Z82202.1-201ENST00000623446 1880 ntBASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.56■□□□□ 0.72
CFAP61Q8NHU2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms