Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF7Q8N684 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CPSF7Q8N684 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CPSF7Q8N684 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF7Q8N684 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CPSF7Q8N684 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF7Q8N684 AC120498.9-201ENST00000339021 3867 ntBASIC18.93■□□□□ 0.62
CPSF7Q8N684 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CPSF7Q8N684 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CPSF7Q8N684 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF7Q8N684 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF7Q8N684 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF7Q8N684 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF7Q8N684 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF7Q8N684 AC026471.1-201ENST00000564629 3026 ntBASIC18.92■□□□□ 0.62
CPSF7Q8N684 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF7Q8N684 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF7Q8N684 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF7Q8N684 DUSP5P2-201ENST00000426873 1033 ntBASIC18.92■□□□□ 0.62
CPSF7Q8N684 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.92■□□□□ 0.62
CPSF7Q8N684 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.92■□□□□ 0.62
CPSF7Q8N684 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.92■□□□□ 0.62
CPSF7Q8N684 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.92■□□□□ 0.62
CPSF7Q8N684 AC083880.1-201ENST00000608266 535 ntBASIC18.92■□□□□ 0.62
CPSF7Q8N684 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF7Q8N684 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CPSF7Q8N684 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.92■□□□□ 0.62
CPSF7Q8N684 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CPSF7Q8N684 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.92■□□□□ 0.62
CPSF7Q8N684 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CPSF7Q8N684 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CPSF7Q8N684 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF7Q8N684 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CPSF7Q8N684 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 AC006333.2-201ENST00000607957 2099 ntBASIC18.91■□□□□ 0.62
CPSF7Q8N684 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
CPSF7Q8N684 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CPSF7Q8N684 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 HLA-G-202ENST00000376815 851 ntBASIC18.91■□□□□ 0.62
CPSF7Q8N684 HLA-G-203ENST00000376818 1127 ntBASIC18.91■□□□□ 0.62
CPSF7Q8N684 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CPSF7Q8N684 AC097658.1-201ENST00000475555 843 ntBASIC18.91■□□□□ 0.62
CPSF7Q8N684 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.91■□□□□ 0.62
CPSF7Q8N684 AC091874.3-201ENST00000512672 1195 ntBASIC18.91■□□□□ 0.62
CPSF7Q8N684 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.91■□□□□ 0.62
CPSF7Q8N684 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.91■□□□□ 0.62
CPSF7Q8N684 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.91■□□□□ 0.62
CPSF7Q8N684 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.91■□□□□ 0.62
CPSF7Q8N684 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.91■□□□□ 0.62
CPSF7Q8N684 MYC-209ENST00000641252 345 ntBASIC18.91■□□□□ 0.62
CPSF7Q8N684 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CPSF7Q8N684 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.91■□□□□ 0.62
CPSF7Q8N684 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF7Q8N684 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CPSF7Q8N684 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CPSF7Q8N684 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.9■□□□□ 0.62
CPSF7Q8N684 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF7Q8N684 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.9■□□□□ 0.62
CPSF7Q8N684 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF7Q8N684 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF7Q8N684 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CPSF7Q8N684 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF7Q8N684 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.9■□□□□ 0.62
CPSF7Q8N684 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF7Q8N684 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF7Q8N684 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CPSF7Q8N684 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF7Q8N684 AL355472.2-201ENST00000422958 438 ntBASIC18.9■□□□□ 0.62
CPSF7Q8N684 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.9■□□□□ 0.62
CPSF7Q8N684 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.9■□□□□ 0.62
CPSF7Q8N684 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF7Q8N684 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF7Q8N684 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF7Q8N684 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.9■□□□□ 0.62
CPSF7Q8N684 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.9■□□□□ 0.62
CPSF7Q8N684 AL049812.1-201ENST00000432563 2267 ntBASIC18.9■□□□□ 0.62
CPSF7Q8N684 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.9■□□□□ 0.62
CPSF7Q8N684 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CPSF7Q8N684 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF7Q8N684 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF7Q8N684 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CPSF7Q8N684 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CPSF7Q8N684 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms