Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.2■□□□□ 0.82
SCML4Q8N228 AP000692.2-201ENST00000608391 879 ntBASIC20.2■□□□□ 0.82
SCML4Q8N228 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCML4Q8N228 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SCML4Q8N228 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCML4Q8N228 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.2■□□□□ 0.82
SCML4Q8N228 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCML4Q8N228 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCML4Q8N228 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCML4Q8N228 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCML4Q8N228 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.19■□□□□ 0.82
SCML4Q8N228 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.19■□□□□ 0.82
SCML4Q8N228 RBM17P1-201ENST00000453646 1190 ntBASIC20.19■□□□□ 0.82
SCML4Q8N228 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCML4Q8N228 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.19■□□□□ 0.82
SCML4Q8N228 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCML4Q8N228 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCML4Q8N228 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SCML4Q8N228 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCML4Q8N228 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCML4Q8N228 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCML4Q8N228 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.19■□□□□ 0.82
SCML4Q8N228 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCML4Q8N228 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SCML4Q8N228 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCML4Q8N228 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCML4Q8N228 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCML4Q8N228 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCML4Q8N228 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SCML4Q8N228 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCML4Q8N228 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.18■□□□□ 0.82
SCML4Q8N228 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.18■□□□□ 0.82
SCML4Q8N228 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.18■□□□□ 0.82
SCML4Q8N228 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.18■□□□□ 0.82
SCML4Q8N228 AC008040.2-201ENST00000461049 708 ntBASIC20.18■□□□□ 0.82
SCML4Q8N228 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
SCML4Q8N228 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SCML4Q8N228 AC011298.2-201ENST00000617989 482 ntBASIC20.18■□□□□ 0.82
SCML4Q8N228 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SCML4Q8N228 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCML4Q8N228 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.18■□□□□ 0.82
SCML4Q8N228 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.18■□□□□ 0.82
SCML4Q8N228 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.18■□□□□ 0.82
SCML4Q8N228 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
SCML4Q8N228 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.17■□□□□ 0.82
SCML4Q8N228 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.17■□□□□ 0.82
SCML4Q8N228 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.17■□□□□ 0.82
SCML4Q8N228 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCML4Q8N228 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCML4Q8N228 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCML4Q8N228 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCML4Q8N228 UNC93B2-201ENST00000285383 730 ntBASIC20.17■□□□□ 0.82
SCML4Q8N228 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.17■□□□□ 0.82
SCML4Q8N228 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SCML4Q8N228 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.17■□□□□ 0.82
SCML4Q8N228 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.17■□□□□ 0.82
SCML4Q8N228 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.17■□□□□ 0.82
SCML4Q8N228 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SCML4Q8N228 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCML4Q8N228 Z82202.1-201ENST00000623446 1880 ntBASIC20.17■□□□□ 0.82
SCML4Q8N228 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCML4Q8N228 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SCML4Q8N228 AL158211.5-201ENST00000623583 2518 ntBASIC20.17■□□□□ 0.82
SCML4Q8N228 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCML4Q8N228 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCML4Q8N228 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.17■□□□□ 0.82
SCML4Q8N228 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.17■□□□□ 0.82
SCML4Q8N228 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.16■□□□□ 0.82
SCML4Q8N228 PCDHAC2-203ENST00000615316 3011 ntBASIC20.16■□□□□ 0.82
SCML4Q8N228 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCML4Q8N228 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
SCML4Q8N228 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCML4Q8N228 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SCML4Q8N228 SDHAP1-207ENST00000440850 2000 ntBASIC20.16■□□□□ 0.82
SCML4Q8N228 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.16■□□□□ 0.82
SCML4Q8N228 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.16■□□□□ 0.82
SCML4Q8N228 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.16■□□□□ 0.82
SCML4Q8N228 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.16■□□□□ 0.82
SCML4Q8N228 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCML4Q8N228 AC096733.2-201ENST00000609937 1394 ntBASIC20.16■□□□□ 0.82
SCML4Q8N228 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCML4Q8N228 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCML4Q8N228 AFG3L1P-217ENST00000557444 2447 ntBASIC20.16■□□□□ 0.82
SCML4Q8N228 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SCML4Q8N228 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCML4Q8N228 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.16■□□□□ 0.82
SCML4Q8N228 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCML4Q8N228 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.16■□□□□ 0.82
SCML4Q8N228 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCML4Q8N228 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.16■□□□□ 0.82
SCML4Q8N228 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCML4Q8N228 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCML4Q8N228 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SCML4Q8N228 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.15■□□□□ 0.82
SCML4Q8N228 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCML4Q8N228 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SCML4Q8N228 TSPY21P-201ENST00000433481 731 ntBASIC20.15■□□□□ 0.82
SCML4Q8N228 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCML4Q8N228 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.15■□□□□ 0.82
SCML4Q8N228 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms