Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 UBE2DNL-204ENST00000602536 740 ntBASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM42Q8IWZ5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.3■□□□□ 0.68
TRIM42Q8IWZ5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM42Q8IWZ5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 AL137784.2-201ENST00000607332 1000 ntBASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 AC105020.6-201ENST00000621523 1217 ntBASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 AC092437.1-201ENST00000624794 1048 ntBASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM42Q8IWZ5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms