Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00346Q8IVM7 TNXA-203ENST00000507684 2038 ntBASIC17.14■□□□□ 0.34
LINC00346Q8IVM7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
LINC00346Q8IVM7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00346Q8IVM7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 HLA-L-209ENST00000420110 1011 ntBASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 AC008687.6-201ENST00000596318 630 ntBASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 ZNF815P-204ENST00000434898 1737 ntBASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00346Q8IVM7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms