Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN20Q4JDL3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 GCSHP5-201ENST00000443090 522 ntBASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 TEX21P-204ENST00000641479 1693 ntBASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN20Q4JDL3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN20Q4JDL3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTPN20Q4JDL3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.39■□□□□ 0.86
PTPN20Q4JDL3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 HTR7P1-201ENST00000538670 1336 ntBASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 AC142381.4-202ENST00000563973 229 ntBASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 FAM197Y4-202ENST00000622692 608 ntBASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PTPN20Q4JDL3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms