Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CL1P78423 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CL1P78423 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CX3CL1P78423 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CL1P78423 KRT17P3-201ENST00000420566 1262 ntBASIC15.61■□□□□ 0.09
CX3CL1P78423 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.61■□□□□ 0.09
CX3CL1P78423 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CL1P78423 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.61■□□□□ 0.09
CX3CL1P78423 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CL1P78423 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.61■□□□□ 0.09
CX3CL1P78423 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CL1P78423 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.61■□□□□ 0.09
CX3CL1P78423 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CL1P78423 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CL1P78423 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CX3CL1P78423 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CX3CL1P78423 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CL1P78423 AC026471.1-201ENST00000564629 3026 ntBASIC15.61■□□□□ 0.09
CX3CL1P78423 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CL1P78423 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CL1P78423 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.61■□□□□ 0.09
CX3CL1P78423 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CX3CL1P78423 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CX3CL1P78423 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CL1P78423 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.6■□□□□ 0.09
CX3CL1P78423 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CL1P78423 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CL1P78423 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.6■□□□□ 0.09
CX3CL1P78423 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.6■□□□□ 0.09
CX3CL1P78423 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.6■□□□□ 0.09
CX3CL1P78423 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CL1P78423 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CL1P78423 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
CX3CL1P78423 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.6■□□□□ 0.09
CX3CL1P78423 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CL1P78423 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.6■□□□□ 0.09
CX3CL1P78423 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.6■□□□□ 0.09
CX3CL1P78423 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CL1P78423 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CX3CL1P78423 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CL1P78423 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CL1P78423 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CL1P78423 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.6■□□□□ 0.09
CX3CL1P78423 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.6■□□□□ 0.09
CX3CL1P78423 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CL1P78423 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.6■□□□□ 0.09
CX3CL1P78423 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
CX3CL1P78423 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CL1P78423 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CL1P78423 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.6■□□□□ 0.09
CX3CL1P78423 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CL1P78423 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CX3CL1P78423 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.59■□□□□ 0.09
CX3CL1P78423 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.59■□□□□ 0.09
CX3CL1P78423 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CX3CL1P78423 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.59■□□□□ 0.09
CX3CL1P78423 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.59■□□□□ 0.09
CX3CL1P78423 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.59■□□□□ 0.09
CX3CL1P78423 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CX3CL1P78423 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.59■□□□□ 0.09
CX3CL1P78423 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.59■□□□□ 0.09
CX3CL1P78423 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.59■□□□□ 0.09
CX3CL1P78423 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CX3CL1P78423 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.59■□□□□ 0.09
CX3CL1P78423 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.59■□□□□ 0.09
CX3CL1P78423 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CX3CL1P78423 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CL1P78423 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CX3CL1P78423 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CX3CL1P78423 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CX3CL1P78423 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CX3CL1P78423 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CL1P78423 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CL1P78423 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CL1P78423 LETM1P2-201ENST00000597330 2178 ntBASIC15.58■□□□□ 0.08
CX3CL1P78423 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CL1P78423 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.58■□□□□ 0.08
CX3CL1P78423 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.58■□□□□ 0.08
CX3CL1P78423 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CX3CL1P78423 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CL1P78423 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CX3CL1P78423 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms