Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.03■□□□□ 0.32
LSM6P62312 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.03■□□□□ 0.32
LSM6P62312 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LSM6P62312 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.03■□□□□ 0.32
LSM6P62312 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LSM6P62312 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.03■□□□□ 0.32
LSM6P62312 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.03■□□□□ 0.32
LSM6P62312 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.03■□□□□ 0.32
LSM6P62312 MTDHP1-201ENST00000605323 784 ntBASIC17.03■□□□□ 0.32
LSM6P62312 AC004264.1-201ENST00000608354 794 ntBASIC17.03■□□□□ 0.32
LSM6P62312 AC069544.1-201ENST00000609399 999 ntBASIC17.03■□□□□ 0.32
LSM6P62312 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.03■□□□□ 0.32
LSM6P62312 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.03■□□□□ 0.32
LSM6P62312 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
LSM6P62312 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSM6P62312 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSM6P62312 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSM6P62312 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSM6P62312 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LSM6P62312 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LSM6P62312 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.02■□□□□ 0.32
LSM6P62312 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
LSM6P62312 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSM6P62312 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSM6P62312 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LSM6P62312 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LSM6P62312 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
LSM6P62312 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
LSM6P62312 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LSM6P62312 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LSM6P62312 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSM6P62312 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSM6P62312 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.02■□□□□ 0.32
LSM6P62312 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.02■□□□□ 0.32
LSM6P62312 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSM6P62312 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LSM6P62312 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LSM6P62312 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
LSM6P62312 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.02■□□□□ 0.32
LSM6P62312 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.02■□□□□ 0.32
LSM6P62312 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LSM6P62312 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.02■□□□□ 0.32
LSM6P62312 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.02■□□□□ 0.31
LSM6P62312 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LSM6P62312 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LSM6P62312 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LSM6P62312 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LSM6P62312 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.01■□□□□ 0.31
LSM6P62312 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM6P62312 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LSM6P62312 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM6P62312 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.01■□□□□ 0.31
LSM6P62312 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM6P62312 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.01■□□□□ 0.31
LSM6P62312 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LSM6P62312 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LSM6P62312 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LSM6P62312 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM6P62312 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LSM6P62312 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.01■□□□□ 0.31
LSM6P62312 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
LSM6P62312 AC141586.3-201ENST00000562166 1838 ntBASIC17.01■□□□□ 0.31
LSM6P62312 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.01■□□□□ 0.31
LSM6P62312 AIRN-201ENST00000601203 4374 ntBASIC17.01■□□□□ 0.31
LSM6P62312 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM6P62312 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LSM6P62312 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LSM6P62312 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.01■□□□□ 0.31
LSM6P62312 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM6P62312 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.01■□□□□ 0.31
LSM6P62312 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.01■□□□□ 0.31
LSM6P62312 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.01■□□□□ 0.31
LSM6P62312 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LSM6P62312 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM6P62312 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
LSM6P62312 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM6P62312 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LSM6P62312 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM6P62312 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM6P62312 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.01■□□□□ 0.31
LSM6P62312 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LSM6P62312 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17■□□□□ 0.31
LSM6P62312 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17■□□□□ 0.31
LSM6P62312 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LSM6P62312 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17■□□□□ 0.31
LSM6P62312 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17■□□□□ 0.31
LSM6P62312 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms