Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.67■□□□□ 0.42
CXCR4P61073 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCR4P61073 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CXCR4P61073 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.67■□□□□ 0.42
CXCR4P61073 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CXCR4P61073 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.67■□□□□ 0.42
CXCR4P61073 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.67■□□□□ 0.42
CXCR4P61073 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCR4P61073 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.67■□□□□ 0.42
CXCR4P61073 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CXCR4P61073 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.67■□□□□ 0.42
CXCR4P61073 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXCR4P61073 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CXCR4P61073 MKRN4P-201ENST00000444706 1521 ntBASIC17.67■□□□□ 0.42
CXCR4P61073 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCR4P61073 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCR4P61073 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXCR4P61073 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.67■□□□□ 0.42
CXCR4P61073 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXCR4P61073 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXCR4P61073 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CXCR4P61073 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CXCR4P61073 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CXCR4P61073 AL512353.2-201ENST00000448759 1962 ntBASIC17.66■□□□□ 0.42
CXCR4P61073 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXCR4P61073 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXCR4P61073 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.66■□□□□ 0.42
CXCR4P61073 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CXCR4P61073 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CXCR4P61073 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CXCR4P61073 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CXCR4P61073 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CXCR4P61073 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CXCR4P61073 TERF1P5-201ENST00000477545 1207 ntBASIC17.66■□□□□ 0.42
CXCR4P61073 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.66■□□□□ 0.42
CXCR4P61073 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CXCR4P61073 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXCR4P61073 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.66■□□□□ 0.42
CXCR4P61073 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.66■□□□□ 0.42
CXCR4P61073 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CXCR4P61073 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXCR4P61073 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CXCR4P61073 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.65■□□□□ 0.42
CXCR4P61073 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCR4P61073 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCR4P61073 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCR4P61073 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCR4P61073 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.65■□□□□ 0.42
CXCR4P61073 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.65■□□□□ 0.42
CXCR4P61073 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCR4P61073 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXCR4P61073 AC010536.3-201ENST00000620306 533 ntBASIC17.65■□□□□ 0.42
CXCR4P61073 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CXCR4P61073 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCR4P61073 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.65■□□□□ 0.42
CXCR4P61073 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXCR4P61073 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.65■□□□□ 0.42
CXCR4P61073 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCR4P61073 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.65■□□□□ 0.42
CXCR4P61073 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXCR4P61073 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CXCR4P61073 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.65■□□□□ 0.42
CXCR4P61073 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXCR4P61073 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CXCR4P61073 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CXCR4P61073 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CXCR4P61073 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CXCR4P61073 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CXCR4P61073 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CXCR4P61073 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CXCR4P61073 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CXCR4P61073 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.64■□□□□ 0.41
CXCR4P61073 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CXCR4P61073 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CXCR4P61073 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CXCR4P61073 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CXCR4P61073 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CXCR4P61073 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.64■□□□□ 0.41
CXCR4P61073 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.64■□□□□ 0.41
CXCR4P61073 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.64■□□□□ 0.41
CXCR4P61073 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.64■□□□□ 0.41
CXCR4P61073 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.64■□□□□ 0.41
CXCR4P61073 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CXCR4P61073 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CXCR4P61073 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CXCR4P61073 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
CXCR4P61073 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CXCR4P61073 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CXCR4P61073 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CXCR4P61073 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CXCR4P61073 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CXCR4P61073 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CXCR4P61073 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.63■□□□□ 0.41
CXCR4P61073 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CXCR4P61073 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CXCR4P61073 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CXCR4P61073 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CXCR4P61073 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CXCR4P61073 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.63■□□□□ 0.41
CXCR4P61073 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms