Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 AL049812.1-201ENST00000432563 2267 ntBASIC17.23■□□□□ 0.35
SLC25A1P53007 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC25A1P53007 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC25A1P53007 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC25A1P53007 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC25A1P53007 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SLC25A1P53007 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SLC25A1P53007 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC25A1P53007 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC25A1P53007 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC25A1P53007 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC25A1P53007 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC25A1P53007 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC25A1P53007 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC25A1P53007 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC25A1P53007 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC25A1P53007 SDHAP1-207ENST00000440850 2000 ntBASIC17.22■□□□□ 0.35
SLC25A1P53007 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC25A1P53007 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SLC25A1P53007 TSPY6P-201ENST00000448518 926 ntBASIC17.22■□□□□ 0.35
SLC25A1P53007 AC097658.1-201ENST00000475555 843 ntBASIC17.22■□□□□ 0.35
SLC25A1P53007 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC25A1P53007 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SLC25A1P53007 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC25A1P53007 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC25A1P53007 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC25A1P53007 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC25A1P53007 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC25A1P53007 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC25A1P53007 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC25A1P53007 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC25A1P53007 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SLC25A1P53007 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC25A1P53007 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC25A1P53007 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC25A1P53007 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC25A1P53007 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SLC25A1P53007 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC25A1P53007 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC25A1P53007 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC25A1P53007 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC25A1P53007 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC25A1P53007 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC25A1P53007 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SLC25A1P53007 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC25A1P53007 NCF1B-203ENST00000435988 1254 ntBASIC17.21■□□□□ 0.35
SLC25A1P53007 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC25A1P53007 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.21■□□□□ 0.35
SLC25A1P53007 KRT18P16-201ENST00000510337 1294 ntBASIC17.21■□□□□ 0.35
SLC25A1P53007 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC25A1P53007 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC25A1P53007 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC25A1P53007 AC060766.5-201ENST00000590539 871 ntBASIC17.21■□□□□ 0.35
SLC25A1P53007 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC25A1P53007 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC25A1P53007 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC25A1P53007 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
SLC25A1P53007 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC25A1P53007 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC25A1P53007 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SLC25A1P53007 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC25A1P53007 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC25A1P53007 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLC25A1P53007 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
SLC25A1P53007 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLC25A1P53007 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SLC25A1P53007 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC25A1P53007 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SLC25A1P53007 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.2■□□□□ 0.34
SLC25A1P53007 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC25A1P53007 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
SLC25A1P53007 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC25A1P53007 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC25A1P53007 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC25A1P53007 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC25A1P53007 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC25A1P53007 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SLC25A1P53007 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
SLC25A1P53007 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC25A1P53007 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC25A1P53007 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC25A1P53007 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.2■□□□□ 0.34
SLC25A1P53007 PNMA6B-201ENST00000538162 1200 ntBASIC17.2■□□□□ 0.34
SLC25A1P53007 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC25A1P53007 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC25A1P53007 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC25A1P53007 AC120498.9-201ENST00000339021 3867 ntBASIC17.2■□□□□ 0.34
SLC25A1P53007 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
SLC25A1P53007 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
SLC25A1P53007 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SLC25A1P53007 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SLC25A1P53007 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC25A1P53007 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC25A1P53007 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC25A1P53007 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC25A1P53007 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC25A1P53007 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC25A1P53007 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC25A1P53007 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC25A1P53007 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms