Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
GTF2A1P52655 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 BX664725.1-201ENST00000438252 379 ntBASIC19.01■□□□□ 0.63
GTF2A1P52655 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
GTF2A1P52655 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.01■□□□□ 0.63
GTF2A1P52655 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.01■□□□□ 0.63
GTF2A1P52655 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
GTF2A1P52655 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
GTF2A1P52655 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 AL118508.1-201ENST00000613502 2345 ntBASIC19.01■□□□□ 0.63
GTF2A1P52655 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.01■□□□□ 0.63
GTF2A1P52655 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.01■□□□□ 0.63
GTF2A1P52655 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
GTF2A1P52655 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2A1P52655 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
GTF2A1P52655 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF2A1P52655 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
GTF2A1P52655 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19■□□□□ 0.63
GTF2A1P52655 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19■□□□□ 0.63
GTF2A1P52655 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
GTF2A1P52655 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19■□□□□ 0.63
GTF2A1P52655 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
GTF2A1P52655 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF2A1P52655 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19■□□□□ 0.63
GTF2A1P52655 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF2A1P52655 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19■□□□□ 0.63
GTF2A1P52655 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF2A1P52655 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
GTF2A1P52655 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19■□□□□ 0.63
GTF2A1P52655 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF2A1P52655 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19■□□□□ 0.63
GTF2A1P52655 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19■□□□□ 0.63
GTF2A1P52655 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
GTF2A1P52655 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF2A1P52655 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19■□□□□ 0.63
GTF2A1P52655 TMEM179-206ENST00000616017 1645 ntBASIC19■□□□□ 0.63
GTF2A1P52655 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2A1P52655 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
GTF2A1P52655 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2A1P52655 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2A1P52655 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2A1P52655 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.99■□□□□ 0.63
GTF2A1P52655 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2A1P52655 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.99■□□□□ 0.63
GTF2A1P52655 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
GTF2A1P52655 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2A1P52655 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.99■□□□□ 0.63
GTF2A1P52655 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.99■□□□□ 0.63
GTF2A1P52655 AC092028.1-203ENST00000608262 953 ntBASIC18.99■□□□□ 0.63
GTF2A1P52655 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2A1P52655 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.99■□□□□ 0.63
GTF2A1P52655 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.99■□□□□ 0.63
GTF2A1P52655 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2A1P52655 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2A1P52655 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
GTF2A1P52655 AD000864.1-201ENST00000624076 2295 ntBASIC18.99■□□□□ 0.63
GTF2A1P52655 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2A1P52655 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2A1P52655 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.99■□□□□ 0.63
GTF2A1P52655 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
GTF2A1P52655 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF2A1P52655 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
GTF2A1P52655 LINC00896-202ENST00000609602 2128 ntBASIC18.98■□□□□ 0.63
GTF2A1P52655 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF2A1P52655 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
GTF2A1P52655 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF2A1P52655 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
GTF2A1P52655 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF2A1P52655 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.98■□□□□ 0.63
GTF2A1P52655 AL499627.2-201ENST00000606283 725 ntBASIC18.98■□□□□ 0.63
GTF2A1P52655 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF2A1P52655 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF2A1P52655 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GTF2A1P52655 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.98■□□□□ 0.63
GTF2A1P52655 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GTF2A1P52655 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
GTF2A1P52655 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
GTF2A1P52655 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
GTF2A1P52655 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.98■□□□□ 0.63
GTF2A1P52655 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF2A1P52655 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
GTF2A1P52655 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
GTF2A1P52655 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.98■□□□□ 0.63
GTF2A1P52655 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.98■□□□□ 0.63
GTF2A1P52655 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF2A1P52655 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF2A1P52655 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.97■□□□□ 0.63
GTF2A1P52655 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms