Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.46■□□□□ 0.87
CHKAP35790 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.46■□□□□ 0.87
CHKAP35790 AL049637.2-201ENST00000641778 930 ntBASIC20.46■□□□□ 0.87
CHKAP35790 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHKAP35790 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHKAP35790 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.46■□□□□ 0.87
CHKAP35790 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CHKAP35790 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.46■□□□□ 0.87
CHKAP35790 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHKAP35790 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
CHKAP35790 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.46■□□□□ 0.87
CHKAP35790 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CHKAP35790 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CHKAP35790 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHKAP35790 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHKAP35790 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.45■□□□□ 0.86
CHKAP35790 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHKAP35790 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.45■□□□□ 0.86
CHKAP35790 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CHKAP35790 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHKAP35790 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHKAP35790 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHKAP35790 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHKAP35790 AL353807.1-201ENST00000427475 662 ntBASIC20.45■□□□□ 0.86
CHKAP35790 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.45■□□□□ 0.86
CHKAP35790 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CHKAP35790 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CHKAP35790 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHKAP35790 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.45■□□□□ 0.86
CHKAP35790 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHKAP35790 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.45■□□□□ 0.86
CHKAP35790 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHKAP35790 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHKAP35790 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHKAP35790 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHKAP35790 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHKAP35790 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHKAP35790 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CHKAP35790 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHKAP35790 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHKAP35790 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHKAP35790 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHKAP35790 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CHKAP35790 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHKAP35790 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHKAP35790 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHKAP35790 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.44■□□□□ 0.86
CHKAP35790 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.44■□□□□ 0.86
CHKAP35790 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.44■□□□□ 0.86
CHKAP35790 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.44■□□□□ 0.86
CHKAP35790 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHKAP35790 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHKAP35790 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHKAP35790 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CHKAP35790 KRT17P2-201ENST00000300992 1314 ntBASIC20.44■□□□□ 0.86
CHKAP35790 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHKAP35790 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHKAP35790 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHKAP35790 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHKAP35790 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHKAP35790 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.43■□□□□ 0.86
CHKAP35790 AC116351.2-201ENST00000606540 1585 ntBASIC20.43■□□□□ 0.86
CHKAP35790 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHKAP35790 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHKAP35790 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.43■□□□□ 0.86
CHKAP35790 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHKAP35790 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.43■□□□□ 0.86
CHKAP35790 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.43■□□□□ 0.86
CHKAP35790 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.43■□□□□ 0.86
CHKAP35790 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.43■□□□□ 0.86
CHKAP35790 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHKAP35790 HTR7P1-201ENST00000538670 1336 ntBASIC20.43■□□□□ 0.86
CHKAP35790 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHKAP35790 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CHKAP35790 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CHKAP35790 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHKAP35790 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHKAP35790 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CHKAP35790 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CHKAP35790 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHKAP35790 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHKAP35790 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHKAP35790 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.42■□□□□ 0.86
CHKAP35790 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHKAP35790 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHKAP35790 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.42■□□□□ 0.86
CHKAP35790 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHKAP35790 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHKAP35790 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.42■□□□□ 0.86
CHKAP35790 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHKAP35790 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CHKAP35790 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CHKAP35790 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHKAP35790 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.42■□□□□ 0.86
CHKAP35790 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.42■□□□□ 0.86
CHKAP35790 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.42■□□□□ 0.86
CHKAP35790 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CHKAP35790 AP006587.1-201ENST00000534129 1502 ntBASIC20.42■□□□□ 0.86
CHKAP35790 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHKAP35790 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms