Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.77■□□□□ 0.76
PTPN3P26045 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.77■□□□□ 0.76
PTPN3P26045 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN3P26045 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.77■□□□□ 0.76
PTPN3P26045 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.77■□□□□ 0.76
PTPN3P26045 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.77■□□□□ 0.76
PTPN3P26045 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN3P26045 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.77■□□□□ 0.76
PTPN3P26045 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
PTPN3P26045 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.77■□□□□ 0.76
PTPN3P26045 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN3P26045 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN3P26045 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PTPN3P26045 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PTPN3P26045 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PTPN3P26045 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.76■□□□□ 0.75
PTPN3P26045 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN3P26045 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN3P26045 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN3P26045 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN3P26045 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN3P26045 TEX21P-204ENST00000641479 1693 ntBASIC19.76■□□□□ 0.75
PTPN3P26045 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPN3P26045 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PTPN3P26045 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN3P26045 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPN3P26045 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PTPN3P26045 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.76■□□□□ 0.75
PTPN3P26045 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN3P26045 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN3P26045 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN3P26045 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PTPN3P26045 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.76■□□□□ 0.75
PTPN3P26045 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.76■□□□□ 0.75
PTPN3P26045 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN3P26045 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN3P26045 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PTPN3P26045 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
PTPN3P26045 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN3P26045 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN3P26045 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN3P26045 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN3P26045 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN3P26045 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PTPN3P26045 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN3P26045 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN3P26045 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN3P26045 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN3P26045 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.75■□□□□ 0.75
PTPN3P26045 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN3P26045 AC018445.3-201ENST00000624177 1945 ntBASIC19.75■□□□□ 0.75
PTPN3P26045 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN3P26045 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PTPN3P26045 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN3P26045 KRASP1-201ENST00000407852 552 ntBASIC19.75■□□□□ 0.75
PTPN3P26045 AC239809.2-201ENST00000415381 517 ntBASIC19.75■□□□□ 0.75
PTPN3P26045 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN3P26045 POU5F1P3-201ENST00000428824 1078 ntBASIC19.75■□□□□ 0.75
PTPN3P26045 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.75■□□□□ 0.75
PTPN3P26045 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN3P26045 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN3P26045 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN3P26045 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.75■□□□□ 0.75
PTPN3P26045 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
PTPN3P26045 RN7SL471P-201ENST00000580476 299 ntBASIC19.75■□□□□ 0.75
PTPN3P26045 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN3P26045 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN3P26045 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN3P26045 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN3P26045 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN3P26045 AC087289.5-201ENST00000586076 3175 ntBASIC19.75■□□□□ 0.75
PTPN3P26045 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN3P26045 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN3P26045 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN3P26045 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN3P26045 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.75■□□□□ 0.75
PTPN3P26045 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.75■□□□□ 0.75
PTPN3P26045 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN3P26045 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN3P26045 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN3P26045 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN3P26045 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN3P26045 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN3P26045 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PTPN3P26045 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN3P26045 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN3P26045 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN3P26045 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN3P26045 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN3P26045 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN3P26045 AC128676.1-201ENST00000454392 318 ntBASIC19.74■□□□□ 0.75
PTPN3P26045 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN3P26045 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
PTPN3P26045 C1QL1P1-201ENST00000568105 661 ntBASIC19.74■□□□□ 0.75
PTPN3P26045 AC004264.1-201ENST00000608354 794 ntBASIC19.74■□□□□ 0.75
PTPN3P26045 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN3P26045 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN3P26045 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN3P26045 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN3P26045 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms