Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
APCP25054 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
APCP25054 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APCP25054 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APCP25054 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.36■□□□□ 0.21
APCP25054 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.36■□□□□ 0.21
APCP25054 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
APCP25054 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.36■□□□□ 0.21
APCP25054 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.36■□□□□ 0.21
APCP25054 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.36■□□□□ 0.21
APCP25054 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APCP25054 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.36■□□□□ 0.21
APCP25054 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.36■□□□□ 0.21
APCP25054 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
APCP25054 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
APCP25054 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
APCP25054 MIR1233-2-201ENST00000408138 82 ntBASIC16.36■□□□□ 0.21
APCP25054 MIR1233-1-201ENST00000408722 82 ntBASIC16.36■□□□□ 0.21
APCP25054 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
APCP25054 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
APCP25054 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APCP25054 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.36■□□□□ 0.21
APCP25054 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.36■□□□□ 0.21
APCP25054 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APCP25054 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
APCP25054 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.35■□□□□ 0.21
APCP25054 TMEM179-206ENST00000616017 1645 ntBASIC16.35■□□□□ 0.21
APCP25054 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
APCP25054 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.35■□□□□ 0.21
APCP25054 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.35■□□□□ 0.21
APCP25054 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
APCP25054 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
APCP25054 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
APCP25054 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
APCP25054 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
APCP25054 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
APCP25054 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.35■□□□□ 0.21
APCP25054 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
APCP25054 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.35■□□□□ 0.21
APCP25054 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
APCP25054 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
APCP25054 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
APCP25054 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
APCP25054 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APCP25054 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APCP25054 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APCP25054 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
APCP25054 AL121772.3-201ENST00000610840 674 ntBASIC16.34■□□□□ 0.21
APCP25054 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
APCP25054 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.34■□□□□ 0.21
APCP25054 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APCP25054 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
APCP25054 BX842568.4-201ENST00000421222 227 ntBASIC16.34■□□□□ 0.21
APCP25054 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.34■□□□□ 0.21
APCP25054 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.34■□□□□ 0.21
APCP25054 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.34■□□□□ 0.21
APCP25054 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
APCP25054 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.34■□□□□ 0.21
APCP25054 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
APCP25054 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
APCP25054 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
APCP25054 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
APCP25054 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
APCP25054 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.33■□□□□ 0.21
APCP25054 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
APCP25054 SAPCD2P3-201ENST00000455031 850 ntBASIC16.33■□□□□ 0.21
APCP25054 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.33■□□□□ 0.21
APCP25054 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.33■□□□□ 0.21
APCP25054 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.33■□□□□ 0.21
APCP25054 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APCP25054 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APCP25054 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APCP25054 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
APCP25054 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
APCP25054 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
APCP25054 AC005104.2-201ENST00000427818 678 ntBASIC16.33■□□□□ 0.2
APCP25054 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
APCP25054 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
APCP25054 AL160286.2-201ENST00000567150 934 ntBASIC16.33■□□□□ 0.2
APCP25054 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
APCP25054 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.33■□□□□ 0.2
APCP25054 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.33■□□□□ 0.2
APCP25054 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.33■□□□□ 0.2
APCP25054 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APCP25054 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.32■□□□□ 0.2
APCP25054 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APCP25054 FOSL1P1-201ENST00000511041 816 ntBASIC16.32■□□□□ 0.2
APCP25054 KRT8P26-201ENST00000534154 1276 ntBASIC16.32■□□□□ 0.2
APCP25054 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.32■□□□□ 0.2
APCP25054 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APCP25054 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APCP25054 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APCP25054 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APCP25054 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APCP25054 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.32■□□□□ 0.2
APCP25054 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APCP25054 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APCP25054 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APCP25054 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.32■□□□□ 0.2
APCP25054 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms