Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT4P19013 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT4P19013 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT4P19013 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT4P19013 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT4P19013 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT4P19013 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT4P19013 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT4P19013 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT4P19013 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT4P19013 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT4P19013 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT4P19013 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT4P19013 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT4P19013 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT4P19013 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT4P19013 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT4P19013 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT4P19013 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT4P19013 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT4P19013 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
KRT4P19013 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT4P19013 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT4P19013 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT4P19013 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT4P19013 CNN2P6-201ENST00000439038 900 ntBASIC19.44■□□□□ 0.7
KRT4P19013 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.44■□□□□ 0.7
KRT4P19013 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.44■□□□□ 0.7
KRT4P19013 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT4P19013 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT4P19013 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT4P19013 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT4P19013 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT4P19013 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT4P19013 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT4P19013 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT4P19013 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
KRT4P19013 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
KRT4P19013 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
KRT4P19013 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT4P19013 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT4P19013 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT4P19013 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT4P19013 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
KRT4P19013 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.43■□□□□ 0.7
KRT4P19013 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT4P19013 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT4P19013 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
KRT4P19013 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT4P19013 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT4P19013 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.43■□□□□ 0.7
KRT4P19013 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT4P19013 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT4P19013 AC116351.2-201ENST00000606540 1585 ntBASIC19.43■□□□□ 0.7
KRT4P19013 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT4P19013 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT4P19013 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.43■□□□□ 0.7
KRT4P19013 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
KRT4P19013 AC005332.8-201ENST00000622750 2735 ntBASIC19.43■□□□□ 0.7
KRT4P19013 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT4P19013 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT4P19013 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KRT4P19013 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KRT4P19013 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT4P19013 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
KRT4P19013 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
KRT4P19013 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT4P19013 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT4P19013 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT4P19013 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT4P19013 AL390961.4-201ENST00000623958 2535 ntBASIC19.42■□□□□ 0.7
KRT4P19013 AC135050.7-201ENST00000624508 2218 ntBASIC19.42■□□□□ 0.7
KRT4P19013 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT4P19013 WIZP1-201ENST00000531444 2299 ntBASIC19.42■□□□□ 0.7
KRT4P19013 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT4P19013 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
KRT4P19013 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KRT4P19013 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT4P19013 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT4P19013 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT4P19013 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT4P19013 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT4P19013 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.41■□□□□ 0.7
KRT4P19013 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT4P19013 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT4P19013 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT4P19013 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
KRT4P19013 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT4P19013 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
KRT4P19013 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT4P19013 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT4P19013 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT4P19013 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT4P19013 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.41■□□□□ 0.7
KRT4P19013 ZNRF2P3-201ENST00000424200 374 ntBASIC19.41■□□□□ 0.7
KRT4P19013 AL589743.5-201ENST00000616611 1050 ntBASIC19.41■□□□□ 0.7
KRT4P19013 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT4P19013 AC018470.1-201ENST00000624790 3129 ntBASIC19.41■□□□□ 0.7
KRT4P19013 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT4P19013 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms