Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HTR1AP08908 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HTR1AP08908 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.68■□□□□ 0.42
HTR1AP08908 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HTR1AP08908 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HTR1AP08908 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HTR1AP08908 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HTR1AP08908 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HTR1AP08908 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.68■□□□□ 0.42
HTR1AP08908 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HTR1AP08908 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.68■□□□□ 0.42
HTR1AP08908 TERF1P2-201ENST00000583350 1212 ntBASIC17.68■□□□□ 0.42
HTR1AP08908 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.68■□□□□ 0.42
HTR1AP08908 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HTR1AP08908 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HTR1AP08908 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HTR1AP08908 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HTR1AP08908 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HTR1AP08908 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.68■□□□□ 0.42
HTR1AP08908 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.68■□□□□ 0.42
HTR1AP08908 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1AP08908 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HTR1AP08908 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HTR1AP08908 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1AP08908 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.67■□□□□ 0.42
HTR1AP08908 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1AP08908 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1AP08908 KRT8P17-201ENST00000453110 1448 ntBASIC17.67■□□□□ 0.42
HTR1AP08908 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1AP08908 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1AP08908 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1AP08908 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.67■□□□□ 0.42
HTR1AP08908 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.67■□□□□ 0.42
HTR1AP08908 SLC7A5P1-201ENST00000568957 537 ntBASIC17.67■□□□□ 0.42
HTR1AP08908 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.67■□□□□ 0.42
HTR1AP08908 AL356652.1-201ENST00000615962 565 ntBASIC17.67■□□□□ 0.42
HTR1AP08908 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1AP08908 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1AP08908 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1AP08908 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1AP08908 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1AP08908 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1AP08908 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1AP08908 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
HTR1AP08908 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1AP08908 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1AP08908 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1AP08908 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1AP08908 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1AP08908 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1AP08908 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.66■□□□□ 0.42
HTR1AP08908 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.66■□□□□ 0.42
HTR1AP08908 AC139713.2-201ENST00000641328 2723 ntBASIC17.66■□□□□ 0.42
HTR1AP08908 AL512353.2-201ENST00000448759 1962 ntBASIC17.66■□□□□ 0.42
HTR1AP08908 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1AP08908 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HTR1AP08908 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1AP08908 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1AP08908 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.66■□□□□ 0.42
HTR1AP08908 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.66■□□□□ 0.42
HTR1AP08908 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1AP08908 PGM5P4-201ENST00000421970 445 ntBASIC17.66■□□□□ 0.42
HTR1AP08908 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.66■□□□□ 0.42
HTR1AP08908 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1AP08908 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.66■□□□□ 0.42
HTR1AP08908 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.66■□□□□ 0.42
HTR1AP08908 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.66■□□□□ 0.42
HTR1AP08908 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HTR1AP08908 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.66■□□□□ 0.42
HTR1AP08908 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.66■□□□□ 0.42
HTR1AP08908 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.66■□□□□ 0.42
HTR1AP08908 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1AP08908 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1AP08908 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1AP08908 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1AP08908 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.66■□□□□ 0.42
HTR1AP08908 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.66■□□□□ 0.42
HTR1AP08908 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.66■□□□□ 0.42
HTR1AP08908 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
HTR1AP08908 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HTR1AP08908 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.66■□□□□ 0.42
HTR1AP08908 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HTR1AP08908 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1AP08908 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.66■□□□□ 0.42
HTR1AP08908 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.66■□□□□ 0.42
HTR1AP08908 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HTR1AP08908 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.65■□□□□ 0.42
HTR1AP08908 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1AP08908 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1AP08908 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.65■□□□□ 0.42
HTR1AP08908 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.65■□□□□ 0.42
HTR1AP08908 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1AP08908 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1AP08908 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1AP08908 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1AP08908 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1AP08908 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.65■□□□□ 0.42
HTR1AP08908 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1AP08908 AC097381.1-201ENST00000429019 1296 ntBASIC17.65■□□□□ 0.42
HTR1AP08908 AC123595.1-201ENST00000440769 1046 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms