Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHGBP05060 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHGBP05060 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
CHGBP05060 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHGBP05060 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHGBP05060 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.34■■□□□ 1.33
CHGBP05060 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.34■■□□□ 1.33
CHGBP05060 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.34■■□□□ 1.33
CHGBP05060 AC116562.4-201ENST00000641316 2276 ntBASIC23.34■■□□□ 1.33
CHGBP05060 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CHGBP05060 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHGBP05060 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHGBP05060 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHGBP05060 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.34■■□□□ 1.33
CHGBP05060 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.34■■□□□ 1.33
CHGBP05060 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.34■■□□□ 1.33
CHGBP05060 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.34■■□□□ 1.33
CHGBP05060 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHGBP05060 AC079598.2-202ENST00000546624 1451 ntBASIC23.34■■□□□ 1.33
CHGBP05060 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.34■■□□□ 1.33
CHGBP05060 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
CHGBP05060 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHGBP05060 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHGBP05060 KRT8P41-201ENST00000533985 1514 ntBASIC23.33■■□□□ 1.33
CHGBP05060 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHGBP05060 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHGBP05060 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC23.33■■□□□ 1.33
CHGBP05060 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC23.33■■□□□ 1.33
CHGBP05060 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHGBP05060 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHGBP05060 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHGBP05060 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHGBP05060 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.33■■□□□ 1.33
CHGBP05060 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHGBP05060 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHGBP05060 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
CHGBP05060 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHGBP05060 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.33■■□□□ 1.33
CHGBP05060 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.33■■□□□ 1.33
CHGBP05060 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CHGBP05060 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.33■■□□□ 1.32
CHGBP05060 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
CHGBP05060 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.32
CHGBP05060 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.32■■□□□ 1.32
CHGBP05060 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC23.32■■□□□ 1.32
CHGBP05060 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.32■■□□□ 1.32
CHGBP05060 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHGBP05060 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHGBP05060 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHGBP05060 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHGBP05060 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.32■■□□□ 1.32
CHGBP05060 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CHGBP05060 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHGBP05060 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHGBP05060 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.32■■□□□ 1.32
CHGBP05060 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CHGBP05060 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23.32■■□□□ 1.32
CHGBP05060 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.32■■□□□ 1.32
CHGBP05060 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.32■■□□□ 1.32
CHGBP05060 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.32■■□□□ 1.32
CHGBP05060 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.32■■□□□ 1.32
CHGBP05060 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC23.32■■□□□ 1.32
CHGBP05060 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.32■■□□□ 1.32
CHGBP05060 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHGBP05060 KRT8P9-201ENST00000558927 1449 ntBASIC23.32■■□□□ 1.32
CHGBP05060 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.32■■□□□ 1.32
CHGBP05060 RCC2P6-201ENST00000526625 1557 ntBASIC23.31■■□□□ 1.32
CHGBP05060 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.31■■□□□ 1.32
CHGBP05060 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.31■■□□□ 1.32
CHGBP05060 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
CHGBP05060 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHGBP05060 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHGBP05060 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHGBP05060 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHGBP05060 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHGBP05060 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.31■■□□□ 1.32
CHGBP05060 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHGBP05060 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHGBP05060 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.31■■□□□ 1.32
CHGBP05060 AL390955.1-201ENST00000428694 934 ntBASIC23.31■■□□□ 1.32
CHGBP05060 B3GAT3P1-201ENST00000471720 806 ntBASIC23.31■■□□□ 1.32
CHGBP05060 AC116562.2-201ENST00000507042 360 ntBASIC23.31■■□□□ 1.32
CHGBP05060 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHGBP05060 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.31■■□□□ 1.32
CHGBP05060 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHGBP05060 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHGBP05060 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.3■■□□□ 1.32
CHGBP05060 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.3■■□□□ 1.32
CHGBP05060 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.3■■□□□ 1.32
CHGBP05060 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.3■■□□□ 1.32
CHGBP05060 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CHGBP05060 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHGBP05060 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHGBP05060 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.3■■□□□ 1.32
CHGBP05060 RBM17P1-201ENST00000453646 1190 ntBASIC23.3■■□□□ 1.32
CHGBP05060 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.3■■□□□ 1.32
CHGBP05060 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CHGBP05060 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
CHGBP05060 AP001412.1-201ENST00000608405 714 ntBASIC23.3■■□□□ 1.32
CHGBP05060 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms