Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CD74P04233 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.3■□□□□ 0.2
CD74P04233 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CD74P04233 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD74P04233 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.29■□□□□ 0.2
CD74P04233 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.29■□□□□ 0.2
CD74P04233 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.29■□□□□ 0.2
CD74P04233 TERF1P5-201ENST00000477545 1207 ntBASIC16.29■□□□□ 0.2
CD74P04233 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.29■□□□□ 0.2
CD74P04233 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.29■□□□□ 0.2
CD74P04233 UBE2DNL-204ENST00000602536 740 ntBASIC16.29■□□□□ 0.2
CD74P04233 AC016405.3-201ENST00000607710 860 ntBASIC16.29■□□□□ 0.2
CD74P04233 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.29■□□□□ 0.2
CD74P04233 MYCNOS-205ENST00000641950 531 ntBASIC16.29■□□□□ 0.2
CD74P04233 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.29■□□□□ 0.2
CD74P04233 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CD74P04233 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD74P04233 AC018553.1-201ENST00000616682 1458 ntBASIC16.29■□□□□ 0.2
CD74P04233 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.29■□□□□ 0.2
CD74P04233 IRX1P1-201ENST00000438849 1838 ntBASIC16.29■□□□□ 0.2
CD74P04233 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD74P04233 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.28■□□□□ 0.2
CD74P04233 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD74P04233 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.28■□□□□ 0.2
CD74P04233 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD74P04233 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD74P04233 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD74P04233 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD74P04233 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD74P04233 AC123595.1-201ENST00000440769 1046 ntBASIC16.28■□□□□ 0.2
CD74P04233 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD74P04233 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CD74P04233 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD74P04233 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD74P04233 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.28■□□□□ 0.2
CD74P04233 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD74P04233 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD74P04233 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD74P04233 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
CD74P04233 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD74P04233 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD74P04233 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CD74P04233 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD74P04233 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD74P04233 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.27■□□□□ 0.2
CD74P04233 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD74P04233 AC116351.2-201ENST00000606540 1585 ntBASIC16.27■□□□□ 0.2
CD74P04233 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CD74P04233 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD74P04233 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD74P04233 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD74P04233 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CD74P04233 YBX1P1-201ENST00000445822 960 ntBASIC16.27■□□□□ 0.2
CD74P04233 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD74P04233 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD74P04233 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CD74P04233 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.27■□□□□ 0.19
CD74P04233 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CD74P04233 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD74P04233 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.27■□□□□ 0.19
CD74P04233 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD74P04233 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CD74P04233 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD74P04233 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CD74P04233 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD74P04233 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CD74P04233 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD74P04233 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CD74P04233 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD74P04233 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.26■□□□□ 0.19
CD74P04233 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD74P04233 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD74P04233 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD74P04233 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.26■□□□□ 0.19
CD74P04233 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.26■□□□□ 0.19
CD74P04233 AC007322.4-201ENST00000509611 723 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms