Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 AC010203.1-204ENST00000548782 407 ntBASIC20.21■□□□□ 0.83
LMNAP02545 AL121829.2-201ENST00000620908 328 ntBASIC20.21■□□□□ 0.83
LMNAP02545 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.21■□□□□ 0.83
LMNAP02545 NBPF21P-201ENST00000425093 1451 ntBASIC20.21■□□□□ 0.83
LMNAP02545 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LMNAP02545 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LMNAP02545 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.21■□□□□ 0.83
LMNAP02545 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
LMNAP02545 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LMNAP02545 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.21■□□□□ 0.83
LMNAP02545 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.21■□□□□ 0.83
LMNAP02545 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LMNAP02545 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LMNAP02545 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.2■□□□□ 0.82
LMNAP02545 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.2■□□□□ 0.82
LMNAP02545 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LMNAP02545 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LMNAP02545 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LMNAP02545 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LMNAP02545 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.2■□□□□ 0.82
LMNAP02545 AP002982.1-201ENST00000492365 877 ntBASIC20.2■□□□□ 0.82
LMNAP02545 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.2■□□□□ 0.82
LMNAP02545 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.2■□□□□ 0.82
LMNAP02545 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
LMNAP02545 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.2■□□□□ 0.82
LMNAP02545 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LMNAP02545 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LMNAP02545 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.2■□□□□ 0.82
LMNAP02545 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LMNAP02545 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LMNAP02545 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.2■□□□□ 0.82
LMNAP02545 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LMNAP02545 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LMNAP02545 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LMNAP02545 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LMNAP02545 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.19■□□□□ 0.82
LMNAP02545 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.19■□□□□ 0.82
LMNAP02545 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LMNAP02545 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
LMNAP02545 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
LMNAP02545 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LMNAP02545 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LMNAP02545 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.19■□□□□ 0.82
LMNAP02545 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LMNAP02545 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LMNAP02545 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LMNAP02545 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
LMNAP02545 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.19■□□□□ 0.82
LMNAP02545 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.19■□□□□ 0.82
LMNAP02545 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LMNAP02545 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LMNAP02545 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LMNAP02545 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LMNAP02545 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.19■□□□□ 0.82
LMNAP02545 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.19■□□□□ 0.82
LMNAP02545 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.18■□□□□ 0.82
LMNAP02545 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.18■□□□□ 0.82
LMNAP02545 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
LMNAP02545 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.18■□□□□ 0.82
LMNAP02545 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.18■□□□□ 0.82
LMNAP02545 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.18■□□□□ 0.82
LMNAP02545 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.18■□□□□ 0.82
LMNAP02545 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LMNAP02545 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LMNAP02545 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.18■□□□□ 0.82
LMNAP02545 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LMNAP02545 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.18■□□□□ 0.82
LMNAP02545 AC027702.1-201ENST00000563810 1770 ntBASIC20.18■□□□□ 0.82
LMNAP02545 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LMNAP02545 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
LMNAP02545 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LMNAP02545 AC020907.5-201ENST00000624372 1936 ntBASIC20.17■□□□□ 0.82
LMNAP02545 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LMNAP02545 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LMNAP02545 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LMNAP02545 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LMNAP02545 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LMNAP02545 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LMNAP02545 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms