Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IFNA1P01562 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
IFNA1P01562 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.35■□□□□ 0.05
IFNA1P01562 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
IFNA1P01562 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IFNA1P01562 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
IFNA1P01562 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.35■□□□□ 0.05
IFNA1P01562 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IFNA1P01562 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
IFNA1P01562 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.35■□□□□ 0.05
IFNA1P01562 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.35■□□□□ 0.05
IFNA1P01562 AC011298.3-201ENST00000615796 283 ntBASIC15.35■□□□□ 0.05
IFNA1P01562 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IFNA1P01562 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IFNA1P01562 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IFNA1P01562 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IFNA1P01562 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.35■□□□□ 0.05
IFNA1P01562 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IFNA1P01562 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IFNA1P01562 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IFNA1P01562 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IFNA1P01562 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IFNA1P01562 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.35■□□□□ 0.05
IFNA1P01562 KRT16P2-201ENST00000414673 1423 ntBASIC15.34■□□□□ 0.05
IFNA1P01562 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IFNA1P01562 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
IFNA1P01562 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IFNA1P01562 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IFNA1P01562 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IFNA1P01562 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IFNA1P01562 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.34■□□□□ 0.05
IFNA1P01562 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IFNA1P01562 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IFNA1P01562 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.34■□□□□ 0.05
IFNA1P01562 AC239859.2-201ENST00000444165 318 ntBASIC15.34■□□□□ 0.05
IFNA1P01562 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.34■□□□□ 0.05
IFNA1P01562 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.34■□□□□ 0.05
IFNA1P01562 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.34■□□□□ 0.05
IFNA1P01562 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.34■□□□□ 0.05
IFNA1P01562 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
IFNA1P01562 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
IFNA1P01562 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.34■□□□□ 0.05
IFNA1P01562 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
IFNA1P01562 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
IFNA1P01562 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IFNA1P01562 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IFNA1P01562 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IFNA1P01562 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IFNA1P01562 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IFNA1P01562 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IFNA1P01562 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
IFNA1P01562 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.34■□□□□ 0.05
IFNA1P01562 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IFNA1P01562 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
IFNA1P01562 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.33■□□□□ 0.05
IFNA1P01562 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
IFNA1P01562 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
IFNA1P01562 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IFNA1P01562 AC068880.1-201ENST00000507289 2297 ntBASIC15.33■□□□□ 0.05
IFNA1P01562 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IFNA1P01562 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IFNA1P01562 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFNA1P01562 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFNA1P01562 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.33■□□□□ 0.04
IFNA1P01562 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFNA1P01562 SERBP1P1-201ENST00000396021 1160 ntBASIC15.33■□□□□ 0.04
IFNA1P01562 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.33■□□□□ 0.04
IFNA1P01562 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
IFNA1P01562 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.33■□□□□ 0.04
IFNA1P01562 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFNA1P01562 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.33■□□□□ 0.04
IFNA1P01562 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC15.33■□□□□ 0.04
IFNA1P01562 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFNA1P01562 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFNA1P01562 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.33■□□□□ 0.04
IFNA1P01562 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
IFNA1P01562 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.33■□□□□ 0.04
IFNA1P01562 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.33■□□□□ 0.04
IFNA1P01562 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.33■□□□□ 0.04
IFNA1P01562 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
IFNA1P01562 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFNA1P01562 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFNA1P01562 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.33■□□□□ 0.04
IFNA1P01562 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.33■□□□□ 0.04
IFNA1P01562 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFNA1P01562 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFNA1P01562 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
IFNA1P01562 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFNA1P01562 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFNA1P01562 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
IFNA1P01562 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.33■□□□□ 0.04
IFNA1P01562 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
IFNA1P01562 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNA1P01562 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.32■□□□□ 0.04
IFNA1P01562 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
IFNA1P01562 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
IFNA1P01562 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.32■□□□□ 0.04
IFNA1P01562 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNA1P01562 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNA1P01562 AL031598.1-201ENST00000561511 1773 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms