Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT4O95628 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.22■□□□□ 0.35
CNOT4O95628 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT4O95628 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.22■□□□□ 0.35
CNOT4O95628 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.22■□□□□ 0.35
CNOT4O95628 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT4O95628 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.22■□□□□ 0.35
CNOT4O95628 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.22■□□□□ 0.35
CNOT4O95628 AL445675.2-201ENST00000620291 557 ntBASIC17.22■□□□□ 0.35
CNOT4O95628 AC133561.5-201ENST00000635547 218 ntBASIC17.22■□□□□ 0.35
CNOT4O95628 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CNOT4O95628 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.22■□□□□ 0.35
CNOT4O95628 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT4O95628 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CNOT4O95628 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CNOT4O95628 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT4O95628 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT4O95628 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.22■□□□□ 0.35
CNOT4O95628 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT4O95628 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.21■□□□□ 0.35
CNOT4O95628 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT4O95628 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CNOT4O95628 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT4O95628 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT4O95628 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT4O95628 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT4O95628 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.21■□□□□ 0.35
CNOT4O95628 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CNOT4O95628 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT4O95628 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.21■□□□□ 0.35
CNOT4O95628 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
CNOT4O95628 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT4O95628 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CNOT4O95628 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CNOT4O95628 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT4O95628 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.21■□□□□ 0.35
CNOT4O95628 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.21■□□□□ 0.35
CNOT4O95628 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT4O95628 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.21■□□□□ 0.35
CNOT4O95628 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT4O95628 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.21■□□□□ 0.35
CNOT4O95628 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CNOT4O95628 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.21■□□□□ 0.35
CNOT4O95628 CD177P1-201ENST00000606252 935 ntBASIC17.21■□□□□ 0.35
CNOT4O95628 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT4O95628 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.21■□□□□ 0.35
CNOT4O95628 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.21■□□□□ 0.35
CNOT4O95628 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT4O95628 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT4O95628 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT4O95628 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT4O95628 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CNOT4O95628 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CNOT4O95628 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CNOT4O95628 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT4O95628 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.35
CNOT4O95628 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT4O95628 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CNOT4O95628 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT4O95628 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT4O95628 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT4O95628 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT4O95628 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CNOT4O95628 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CNOT4O95628 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.2■□□□□ 0.34
CNOT4O95628 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CNOT4O95628 TCF3P1-201ENST00000423021 1937 ntBASIC17.2■□□□□ 0.34
CNOT4O95628 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CNOT4O95628 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT4O95628 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT4O95628 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.2■□□□□ 0.34
CNOT4O95628 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.2■□□□□ 0.34
CNOT4O95628 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT4O95628 AC026271.3-201ENST00000571884 352 ntBASIC17.2■□□□□ 0.34
CNOT4O95628 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.2■□□□□ 0.34
CNOT4O95628 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.2■□□□□ 0.34
CNOT4O95628 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CNOT4O95628 KRT16P1-201ENST00000399124 1418 ntBASIC17.2■□□□□ 0.34
CNOT4O95628 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT4O95628 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CNOT4O95628 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CNOT4O95628 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT4O95628 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CNOT4O95628 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNOT4O95628 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CNOT4O95628 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.19■□□□□ 0.34
CNOT4O95628 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT4O95628 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT4O95628 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.19■□□□□ 0.34
CNOT4O95628 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT4O95628 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CNOT4O95628 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT4O95628 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT4O95628 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT4O95628 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.19■□□□□ 0.34
CNOT4O95628 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT4O95628 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT4O95628 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CNOT4O95628 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT4O95628 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms