Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
USP1O94782 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP1O94782 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP1O94782 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.6■□□□□ 0.73
USP1O94782 AC098934.4-201ENST00000564127 592 ntBASIC19.6■□□□□ 0.73
USP1O94782 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.6■□□□□ 0.73
USP1O94782 AC060766.5-201ENST00000590539 871 ntBASIC19.6■□□□□ 0.73
USP1O94782 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.6■□□□□ 0.73
USP1O94782 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.6■□□□□ 0.73
USP1O94782 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP1O94782 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP1O94782 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.6■□□□□ 0.73
USP1O94782 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP1O94782 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
USP1O94782 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.6■□□□□ 0.73
USP1O94782 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP1O94782 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP1O94782 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP1O94782 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP1O94782 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP1O94782 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.59■□□□□ 0.73
USP1O94782 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.59■□□□□ 0.73
USP1O94782 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP1O94782 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
USP1O94782 LINC01465-201ENST00000408887 1940 ntBASIC19.59■□□□□ 0.73
USP1O94782 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
USP1O94782 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP1O94782 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.59■□□□□ 0.73
USP1O94782 PNMA6B-201ENST00000538162 1200 ntBASIC19.59■□□□□ 0.73
USP1O94782 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.59■□□□□ 0.73
USP1O94782 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
USP1O94782 AL121906.2-201ENST00000621597 723 ntBASIC19.59■□□□□ 0.73
USP1O94782 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.59■□□□□ 0.73
USP1O94782 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP1O94782 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
USP1O94782 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP1O94782 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP1O94782 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP1O94782 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP1O94782 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP1O94782 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.59■□□□□ 0.73
USP1O94782 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP1O94782 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP1O94782 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP1O94782 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
USP1O94782 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.58■□□□□ 0.73
USP1O94782 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
USP1O94782 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP1O94782 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
USP1O94782 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
USP1O94782 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP1O94782 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USP1O94782 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.58■□□□□ 0.73
USP1O94782 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.58■□□□□ 0.73
USP1O94782 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.58■□□□□ 0.72
USP1O94782 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.58■□□□□ 0.72
USP1O94782 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.58■□□□□ 0.72
USP1O94782 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.58■□□□□ 0.72
USP1O94782 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.58■□□□□ 0.72
USP1O94782 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP1O94782 ZNF815P-204ENST00000434898 1737 ntBASIC19.58■□□□□ 0.72
USP1O94782 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP1O94782 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP1O94782 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
USP1O94782 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
USP1O94782 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.58■□□□□ 0.72
USP1O94782 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP1O94782 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.58■□□□□ 0.72
USP1O94782 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USP1O94782 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.57■□□□□ 0.72
USP1O94782 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP1O94782 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP1O94782 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP1O94782 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
USP1O94782 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP1O94782 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP1O94782 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
USP1O94782 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.57■□□□□ 0.72
USP1O94782 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP1O94782 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP1O94782 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP1O94782 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.57■□□□□ 0.72
USP1O94782 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
USP1O94782 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
USP1O94782 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.57■□□□□ 0.72
USP1O94782 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.57■□□□□ 0.72
USP1O94782 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.57■□□□□ 0.72
USP1O94782 AC142086.2-201ENST00000569753 217 ntBASIC19.57■□□□□ 0.72
USP1O94782 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
USP1O94782 AC083880.1-201ENST00000608266 535 ntBASIC19.57■□□□□ 0.72
USP1O94782 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
USP1O94782 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP1O94782 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP1O94782 LETM1P2-201ENST00000597330 2178 ntBASIC19.57■□□□□ 0.72
USP1O94782 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
USP1O94782 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP1O94782 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP1O94782 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.57■□□□□ 0.72
USP1O94782 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.57■□□□□ 0.72
USP1O94782 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms