Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.41■□□□□ 0.54
PROM1O43490 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.41■□□□□ 0.54
PROM1O43490 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.41■□□□□ 0.54
PROM1O43490 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.41■□□□□ 0.54
PROM1O43490 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.41■□□□□ 0.54
PROM1O43490 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.41■□□□□ 0.54
PROM1O43490 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.41■□□□□ 0.54
PROM1O43490 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PROM1O43490 AC124016.1-201ENST00000609552 612 ntBASIC18.41■□□□□ 0.54
PROM1O43490 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.41■□□□□ 0.54
PROM1O43490 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PROM1O43490 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
PROM1O43490 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PROM1O43490 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PROM1O43490 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
PROM1O43490 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
PROM1O43490 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.41■□□□□ 0.54
PROM1O43490 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PROM1O43490 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.41■□□□□ 0.54
PROM1O43490 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PROM1O43490 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PROM1O43490 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.4■□□□□ 0.54
PROM1O43490 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.4■□□□□ 0.54
PROM1O43490 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PROM1O43490 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PROM1O43490 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PROM1O43490 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PROM1O43490 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PROM1O43490 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.4■□□□□ 0.54
PROM1O43490 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.4■□□□□ 0.54
PROM1O43490 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.4■□□□□ 0.54
PROM1O43490 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.4■□□□□ 0.54
PROM1O43490 AC004264.1-201ENST00000608354 794 ntBASIC18.4■□□□□ 0.54
PROM1O43490 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PROM1O43490 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.4■□□□□ 0.54
PROM1O43490 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PROM1O43490 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PROM1O43490 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PROM1O43490 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.4■□□□□ 0.54
PROM1O43490 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PROM1O43490 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PROM1O43490 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PROM1O43490 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PROM1O43490 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.4■□□□□ 0.54
PROM1O43490 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
PROM1O43490 AC116562.4-201ENST00000641316 2276 ntBASIC18.39■□□□□ 0.54
PROM1O43490 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PROM1O43490 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.39■□□□□ 0.53
PROM1O43490 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PROM1O43490 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
PROM1O43490 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PROM1O43490 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.39■□□□□ 0.53
PROM1O43490 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
PROM1O43490 AC110285.5-201ENST00000611501 352 ntBASIC18.39■□□□□ 0.53
PROM1O43490 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PROM1O43490 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PROM1O43490 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PROM1O43490 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.39■□□□□ 0.53
PROM1O43490 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PROM1O43490 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PROM1O43490 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PROM1O43490 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PROM1O43490 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PROM1O43490 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.38■□□□□ 0.53
PROM1O43490 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.38■□□□□ 0.53
PROM1O43490 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PROM1O43490 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PROM1O43490 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PROM1O43490 Z82202.1-201ENST00000623446 1880 ntBASIC18.38■□□□□ 0.53
PROM1O43490 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PROM1O43490 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PROM1O43490 C1QBPP2-201ENST00000528754 825 ntBASIC18.38■□□□□ 0.53
PROM1O43490 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.38■□□□□ 0.53
PROM1O43490 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PROM1O43490 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PROM1O43490 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PROM1O43490 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PROM1O43490 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PROM1O43490 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PROM1O43490 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.38■□□□□ 0.53
PROM1O43490 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PROM1O43490 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PROM1O43490 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PROM1O43490 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PROM1O43490 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PROM1O43490 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PROM1O43490 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PROM1O43490 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PROM1O43490 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
PROM1O43490 KRT16P5-201ENST00000455284 522 ntBASIC18.37■□□□□ 0.53
PROM1O43490 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PROM1O43490 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms