Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDH17O14917 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH17O14917 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDH17O14917 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDH17O14917 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH17O14917 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH17O14917 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH17O14917 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH17O14917 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH17O14917 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
PCDH17O14917 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH17O14917 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH17O14917 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH17O14917 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH17O14917 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDH17O14917 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH17O14917 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PCDH17O14917 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH17O14917 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH17O14917 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PCDH17O14917 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH17O14917 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH17O14917 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PCDH17O14917 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PCDH17O14917 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDH17O14917 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDH17O14917 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH17O14917 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDH17O14917 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH17O14917 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
PCDH17O14917 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PCDH17O14917 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCDH17O14917 AP006587.1-201ENST00000534129 1502 ntBASIC18.49■□□□□ 0.55
PCDH17O14917 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
PCDH17O14917 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
PCDH17O14917 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH17O14917 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH17O14917 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH17O14917 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH17O14917 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PCDH17O14917 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH17O14917 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH17O14917 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.49■□□□□ 0.55
PCDH17O14917 SNORA78-201ENST00000459373 127 ntBASIC18.49■□□□□ 0.55
PCDH17O14917 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
PCDH17O14917 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.49■□□□□ 0.55
PCDH17O14917 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDH17O14917 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.49■□□□□ 0.55
PCDH17O14917 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.49■□□□□ 0.55
PCDH17O14917 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDH17O14917 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH17O14917 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH17O14917 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDH17O14917 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH17O14917 BX323043.1-201ENST00000641006 1765 ntBASIC18.49■□□□□ 0.55
PCDH17O14917 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDH17O14917 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDH17O14917 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH17O14917 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PCDH17O14917 HTR7P1-201ENST00000538670 1336 ntBASIC18.49■□□□□ 0.55
PCDH17O14917 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PCDH17O14917 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH17O14917 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
PCDH17O14917 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDH17O14917 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PCDH17O14917 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH17O14917 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH17O14917 YBX1P10-201ENST00000444752 975 ntBASIC18.48■□□□□ 0.55
PCDH17O14917 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH17O14917 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH17O14917 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH17O14917 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCDH17O14917 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH17O14917 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.48■□□□□ 0.55
PCDH17O14917 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PCDH17O14917 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH17O14917 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH17O14917 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH17O14917 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDH17O14917 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH17O14917 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDH17O14917 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH17O14917 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDH17O14917 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDH17O14917 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH17O14917 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH17O14917 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH17O14917 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH17O14917 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH17O14917 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.47■□□□□ 0.55
PCDH17O14917 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDH17O14917 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.47■□□□□ 0.55
PCDH17O14917 AF186192.3-201ENST00000583427 947 ntBASIC18.47■□□□□ 0.55
PCDH17O14917 AC073195.1-201ENST00000607241 877 ntBASIC18.47■□□□□ 0.55
PCDH17O14917 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDH17O14917 PHGDH-210ENST00000641115 1638 ntBASIC18.47■□□□□ 0.55
PCDH17O14917 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH17O14917 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH17O14917 AP000974.1-201ENST00000623909 2387 ntBASIC18.47■□□□□ 0.55
PCDH17O14917 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms