Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 DUSP5P2-201ENST00000426873 1033 ntBASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 WIZP1-201ENST00000531444 2299 ntBASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 MIR663A-201ENST00000385250 93 ntBASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
TRBV5-3A0A0A0MS03 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 CROCCP5-201ENST00000436658 830 ntBASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 AC092118.2-201ENST00000613495 667 ntBASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 AP006587.1-201ENST00000534129 1502 ntBASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.16■□□□□ 0.5
TRBV5-3A0A0A0MS03 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 AC091874.3-201ENST00000512672 1195 ntBASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms