Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC7.98□□□□□ -1.13
NUBP1P53384 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.98□□□□□ -1.13
NUBP1P53384 TTC39C-203ENST00000540918 4117 ntTSL 2 BASIC7.98□□□□□ -1.13
NUBP1P53384 RGS4-204ENST00000421743 3311 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NUBP1P53384 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
NUBP1P53384 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NUBP1P53384 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC7.98□□□□□ -1.13
NUBP1P53384 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NUBP1P53384 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
NUBP1P53384 SMG1P1-202ENST00000309865 4223 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
NUBP1P53384 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
NUBP1P53384 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NUBP1P53384 THBS4-204ENST00000511733 3094 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
NUBP1P53384 TNFRSF19-201ENST00000248484 3276 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
NUBP1P53384 AC105342.1-201ENST00000378334 6848 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
NUBP1P53384 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NUBP1P53384 RNA5SP429-201ENST00000363688 109 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 RN7SKP50-201ENST00000364694 315 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC7.98□□□□□ -1.13
NUBP1P53384 BMS1P22-201ENST00000414726 313 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 RPL12P17-201ENST00000432393 498 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC7.98□□□□□ -1.13
NUBP1P53384 AL451074.1-202ENST00000453762 989 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 ISCUP1-201ENST00000454451 448 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 AC080188.1-201ENST00000491923 567 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 AL117692.1-201ENST00000494283 713 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 RPS4XP20-201ENST00000505751 772 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 RNU6-677P-201ENST00000516914 101 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC7.98□□□□□ -1.13
NUBP1P53384 AC009779.4-201ENST00000554248 611 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 DNM1P33-201ENST00000565222 270 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 IGLJCOR18-201ENST00000584002 424 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 AC005262.1-201ENST00000588562 362 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC7.98□□□□□ -1.13
NUBP1P53384 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.98□□□□□ -1.13
NUBP1P53384 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC7.98□□□□□ -1.13
NUBP1P53384 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.98□□□□□ -1.13
NUBP1P53384 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
NUBP1P53384 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
NUBP1P53384 CLDN2-203ENST00000541806 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NUBP1P53384 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NUBP1P53384 RNF14-205ENST00000394520 4235 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NUBP1P53384 AC145207.5-201ENST00000582866 2682 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
NUBP1P53384 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC7.98□□□□□ -1.13
NUBP1P53384 NF1P9-201ENST00000629326 2008 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 RLIMP1-201ENST00000339626 1680 ntBASIC7.98□□□□□ -1.13
NUBP1P53384 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
NUBP1P53384 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
NUBP1P53384 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
NUBP1P53384 MOBP-201ENST00000311042 3388 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
NUBP1P53384 SLC17A6-201ENST00000263160 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NUBP1P53384 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NUBP1P53384 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.97□□□□□ -1.13
NUBP1P53384 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NUBP1P53384 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
NUBP1P53384 CUBNP3-201ENST00000457461 1784 ntBASIC7.97□□□□□ -1.13
NUBP1P53384 LIMCH1-209ENST00000509277 3474 ntTSL 2 BASIC7.97□□□□□ -1.13
NUBP1P53384 NTRK3-221ENST00000629765 2714 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NUBP1P53384 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
NUBP1P53384 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC7.97□□□□□ -1.13
NUBP1P53384 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NUBP1P53384 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
NUBP1P53384 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
NUBP1P53384 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NUBP1P53384 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NUBP1P53384 ADGRE1-205ENST00000450315 2567 ntTSL 2 BASIC7.97□□□□□ -1.13
NUBP1P53384 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
NUBP1P53384 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NUBP1P53384 AC008985.1-201ENST00000624169 2239 ntBASIC7.97□□□□□ -1.13
NUBP1P53384 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NUBP1P53384 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NUBP1P53384 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.97□□□□□ -1.13
NUBP1P53384 PLP1-223ENST00000621218 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NUBP1P53384 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NUBP1P53384 Y_RNA.240-201ENST00000364469 95 ntBASIC7.97□□□□□ -1.13
NUBP1P53384 RNU1-16P-201ENST00000365477 164 ntBASIC7.97□□□□□ -1.13
NUBP1P53384 RNU6-47P-201ENST00000383866 107 ntBASIC7.97□□□□□ -1.13
NUBP1P53384 RNU6-1035P-201ENST00000384477 107 ntBASIC7.97□□□□□ -1.13
NUBP1P53384 SNORD73A-201ENST00000386062 65 ntBASIC7.97□□□□□ -1.13
NUBP1P53384 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
NUBP1P53384 SNORA53-201ENST00000391141 249 ntBASIC7.97□□□□□ -1.13
NUBP1P53384 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
NUBP1P53384 RNU6ATAC16P-201ENST00000408591 138 ntBASIC7.97□□□□□ -1.13
NUBP1P53384 RNU4-65P-201ENST00000410473 140 ntBASIC7.97□□□□□ -1.13
NUBP1P53384 RNU6-394P-201ENST00000410735 107 ntBASIC7.97□□□□□ -1.13
NUBP1P53384 RNU6-325P-201ENST00000411132 105 ntBASIC7.97□□□□□ -1.13
NUBP1P53384 AC140479.3-201ENST00000418944 1126 ntBASIC7.97□□□□□ -1.13
NUBP1P53384 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC7.97□□□□□ -1.13
NUBP1P53384 CYP4F30P-202ENST00000420048 405 ntBASIC7.97□□□□□ -1.13
NUBP1P53384 AC008481.1-201ENST00000463278 396 ntBASIC7.97□□□□□ -1.13
NUBP1P53384 AC009153.1-201ENST00000485799 496 ntBASIC7.97□□□□□ -1.13
NUBP1P53384 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC7.97□□□□□ -1.13
NUBP1P53384 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.97□□□□□ -1.13
NUBP1P53384 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.97□□□□□ -1.13
NUBP1P53384 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC7.97□□□□□ -1.13
NUBP1P53384 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.97□□□□□ -1.13
NUBP1P53384 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms