RNA–Protein interactions for RNA: ENST00000339626.5

RLIMP1-201, Transcript of ring finger protein, LIM domain interacting pseudogene 1, humanhuman

BASIC

Gene RLIMP1, Length 1,680 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMP1-201ENST00000339626 AEBP2Q6ZN18 517 aaPredicted RBP16.17■□□□□ 0.18
RLIMP1-201ENST00000339626 CHIC1Q5VXU3 224 aa15.52■□□□□ 0.08
RLIMP1-201ENST00000339626 SENP3Q9H4L4 574 aaPredicted RBP13.92□□□□□ -0.18
RLIMP1-201ENST00000339626 PHF23Q9BUL5 403 aaPredicted RBP13.7□□□□□ -0.22
RLIMP1-201ENST00000339626 FOXD1Q16676 465 aa12.88□□□□□ -0.35
RLIMP1-201ENST00000339626 PLPPR3Q6T4P5 718 aa12.5□□□□□ -0.41
RLIMP1-201ENST00000339626 POTEDQ86YR6 584 aa12.13□□□□□ -0.47
RLIMP1-201ENST00000339626 MSH5O43196 834 aa12.13□□□□□ -0.47
RLIMP1-201ENST00000339626 PIAS4Q8N2W9 510 aaPredicted RBP12.13□□□□□ -0.47
RLIMP1-201ENST00000339626 ADRA2BP18089 450 aa12.07□□□□□ -0.48
RLIMP1-201ENST00000339626 PPP6R1Q9UPN7 881 aa12.06□□□□□ -0.48
RLIMP1-201ENST00000339626 SCAF1Q9H7N4 1312 aaKnown RBP11.2□□□□□ -0.62
RLIMP1-201ENST00000339626 MAPK8IP2Q13387 824 aaPredicted RBP11.04□□□□□ -0.64
RLIMP1-201ENST00000339626 DMRT2Q9Y5R5 561 aa11.01□□□□□ -0.65
RLIMP1-201ENST00000339626 PPP4R3CPQ6ZMV5 832 aa10.94□□□□□ -0.66
RLIMP1-201ENST00000339626 CNKSR2Q8WXI2 1034 aa10.73□□□□□ -0.69
RLIMP1-201ENST00000339626 DCAF8L1A6NGE4 600 aa10.66□□□□□ -0.7
RLIMP1-201ENST00000339626 NCBP3Q53F19 620 aaKnown RBP10.64□□□□□ -0.71
RLIMP1-201ENST00000339626 HOXD11P31277 338 aaPredicted RBP10.62□□□□□ -0.71
RLIMP1-201ENST00000339626 RNF216Q9NWF9 866 aaPredicted RBP10.6□□□□□ -0.71
RLIMP1-201ENST00000339626 CACNB1Q02641 598 aaPredicted RBP10.36□□□□□ -0.75
RLIMP1-201ENST00000339626 NPM3O75607 178 aaKnown RBP10.35□□□□□ -0.75
RLIMP1-201ENST00000339626 RNF39Q9H2S5 420 aa10.28□□□□□ -0.76
RLIMP1-201ENST00000339626 DNAJC5BQ9UF47 199 aa10.27□□□□□ -0.77
RLIMP1-201ENST00000339626 KCNA4P22459 653 aa10.22□□□□□ -0.77
RLIMP1-201ENST00000339626 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.22□□□□□ -0.77
RLIMP1-201ENST00000339626 C1QBPQ07021 282 aaKnown RBP10.19□□□□□ -0.78
RLIMP1-201ENST00000339626 NISCHQ9Y2I1 1504 aa10.14□□□□□ -0.79
RLIMP1-201ENST00000339626 U3KPZ7 1027 aaPredicted RBP9.91□□□□□ -0.82
RLIMP1-201ENST00000339626 APLP2Q06481 763 aa9.83□□□□□ -0.84
RLIMP1-201ENST00000339626 SLC4A2P04920 1241 aa9.83□□□□□ -0.84
RLIMP1-201ENST00000339626 CAPN15O75808 1086 aa9.82□□□□□ -0.84
RLIMP1-201ENST00000339626 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.8□□□□□ -0.84
RLIMP1-201ENST00000339626 HNRNPUL2Q1KMD3 747 aaKnown RBP9.8□□□□□ -0.84
RLIMP1-201ENST00000339626 SLC4A1APQ9BWU0 796 aaKnown RBP9.74□□□□□ -0.85
RLIMP1-201ENST00000339626 SPINK5Q9NQ38 1064 aaPredicted RBP9.74□□□□□ -0.85
RLIMP1-201ENST00000339626 SAMD1Q6SPF0 538 aaPredicted RBP9.71□□□□□ -0.85
RLIMP1-201ENST00000339626 ZNF219Q9P2Y4 722 aaPredicted RBP9.67□□□□□ -0.86
RLIMP1-201ENST00000339626 TRHP20396 242 aaPredicted RBP9.66□□□□□ -0.86
RLIMP1-201ENST00000339626 DSG3P32926 999 aa9.65□□□□□ -0.86
RLIMP1-201ENST00000339626 MYCNP04198 464 aaPredicted RBP9.64□□□□□ -0.87
RLIMP1-201ENST00000339626 FOXD4L1Q9NU39 408 aa9.57□□□□□ -0.88
RLIMP1-201ENST00000339626 ABCB7O75027 752 aa9.55□□□□□ -0.88
RLIMP1-201ENST00000339626 POLA2Q14181 598 aa9.39□□□□□ -0.91
RLIMP1-201ENST00000339626 ZBTB22O15209 634 aa9.32□□□□□ -0.92
RLIMP1-201ENST00000339626 POTEHQ6S545 545 aa9.32□□□□□ -0.92
RLIMP1-201ENST00000339626 RBM42Q9BTD8 480 aaKnown RBP9.32□□□□□ -0.92
RLIMP1-201ENST00000339626 ZBTB12Q9Y330 459 aaPredicted RBP9.3□□□□□ -0.92
RLIMP1-201ENST00000339626 ATF5Q9Y2D1 282 aaPredicted RBP9.29□□□□□ -0.92
RLIMP1-201ENST00000339626 ATXN8OSP0DMR3 200 aa9.29□□□□□ -0.92
RLIMP1-201ENST00000339626 FBLN2P98095 1184 aa9.11□□□□□ -0.95
RLIMP1-201ENST00000339626 ABCC9O60706 1549 aa9.1□□□□□ -0.95
RLIMP1-201ENST00000339626 AKT1S1Q96B36 256 aa9.08□□□□□ -0.96
RLIMP1-201ENST00000339626 OSCARQ8IYS5 282 aa9.07□□□□□ -0.96
RLIMP1-201ENST00000339626 CSRNP3Q8WYN3 585 aa9.02□□□□□ -0.97
RLIMP1-201ENST00000339626 CHRDL2Q6WN34 429 aa9.01□□□□□ -0.97
RLIMP1-201ENST00000339626 EHMT2Q96KQ7 1210 aa9.01□□□□□ -0.97
RLIMP1-201ENST00000339626 CCDC180Q9P1Z9 1646 aa9□□□□□ -0.97
RLIMP1-201ENST00000339626 SPDYE2BA6NHP3 402 aa8.96□□□□□ -0.98
RLIMP1-201ENST00000339626 SPDYE6P0CI01 402 aa8.96□□□□□ -0.98
RLIMP1-201ENST00000339626 SPDYE2Q495Y8 402 aa8.96□□□□□ -0.98
RLIMP1-201ENST00000339626 REM2Q8IYK8 340 aaPredicted RBP8.96□□□□□ -0.98
RLIMP1-201ENST00000339626 ZNF692Q9BU19 519 aaPredicted RBP8.88□□□□□ -0.99
RLIMP1-201ENST00000339626 MKRN4PQ13434 485 aaPredicted RBP8.88□□□□□ -0.99
RLIMP1-201ENST00000339626 PITPNM1O00562 1244 aa8.85□□□□□ -0.99
RLIMP1-201ENST00000339626 SPDYE1Q8NFV5 336 aaPredicted RBP8.81□□□□□ -1
RLIMP1-201ENST00000339626 PIP4P2Q8N4L2 257 aa8.79□□□□□ -1
RLIMP1-201ENST00000339626 CLEC11AQ9Y240 323 aa8.79□□□□□ -1
RLIMP1-201ENST00000339626 SSUH2Q9Y2M2 353 aa8.79□□□□□ -1
RLIMP1-201ENST00000339626 FXR2P51116 673 aaKnown RBP eCLIP8.75□□□□□ -1.01
RLIMP1-201ENST00000339626 PABPN1Q86U42 306 aaKnown RBP eCLIP8.72□□□□□ -1.01
RLIMP1-201ENST00000339626 HAX1O00165 279 aa8.68□□□□□ -1.02
RLIMP1-201ENST00000339626 DCAF8L2P0C7V8 631 aa8.68□□□□□ -1.02
RLIMP1-201ENST00000339626 PRR29P0C7W0 189 aa8.66□□□□□ -1.02
RLIMP1-201ENST00000339626 PRKAR2AP13861 404 aaKnown RBP8.66□□□□□ -1.02
RLIMP1-201ENST00000339626 SP7Q8TDD2 431 aaPredicted RBP8.62□□□□□ -1.03
RLIMP1-201ENST00000339626 SPDYE4A6NLX3 237 aa8.61□□□□□ -1.03
RLIMP1-201ENST00000339626 RB1CC1Q8TDY2 1594 aa8.59□□□□□ -1.03
RLIMP1-201ENST00000339626 STAG3Q9UJ98 1225 aa8.58□□□□□ -1.04
RLIMP1-201ENST00000339626 CHADLQ6NUI6 762 aa8.54□□□□□ -1.04
RLIMP1-201ENST00000339626 NACADO15069 1562 aa8.53□□□□□ -1.04
RLIMP1-201ENST00000339626 C19orf67A6NJJ6 358 aa8.47□□□□□ -1.05
RLIMP1-201ENST00000339626 FARP1Q9Y4F1 1045 aaPredicted RBP8.45□□□□□ -1.06
RLIMP1-201ENST00000339626 EVX2Q03828 476 aa8.43□□□□□ -1.06
RLIMP1-201ENST00000339626 CD44P16070 742 aaKnown RBP8.4□□□□□ -1.06
RLIMP1-201ENST00000339626 ZCCHC6Q5VYS8 1495 aaKnown RBP8.4□□□□□ -1.06
RLIMP1-201ENST00000339626 MYO15BQ96JP2 1530 aa8.4□□□□□ -1.06
RLIMP1-201ENST00000339626 UNC13AQ9UPW8 1703 aa8.39□□□□□ -1.07
RLIMP1-201ENST00000339626 CREBZFQ9NS37 354 aa8.38□□□□□ -1.07
RLIMP1-201ENST00000339626 BICRAQ9NZM4 1560 aa8.37□□□□□ -1.07
RLIMP1-201ENST00000339626 NPM1P06748 294 aaKnown RBP eCLIP8.35□□□□□ -1.07
RLIMP1-201ENST00000339626 PAK3O75914 559 aaPredicted RBP8.34□□□□□ -1.07
RLIMP1-201ENST00000339626 GABBR2O75899 941 aa8.34□□□□□ -1.08
RLIMP1-201ENST00000339626 CLCN6P51797 869 aa8.33□□□□□ -1.08
RLIMP1-201ENST00000339626 PLEKHG5O94827 1062 aa8.32□□□□□ -1.08
RLIMP1-201ENST00000339626 DCAF1Q9Y4B6 1507 aa8.32□□□□□ -1.08
RLIMP1-201ENST00000339626 PROM2Q8N271 834 aa8.31□□□□□ -1.08
RLIMP1-201ENST00000339626 ZRANB1Q9UGI0 708 aa8.31□□□□□ -1.08
RLIMP1-201ENST00000339626 SCRIBQ14160 1630 aa8.3□□□□□ -1.08
RLIMP1-201ENST00000339626 FKBP8Q14318 412 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms