RNA–Protein interactions for RNA: ENST00000410473.1

RNU4-65P-201, Transcript of RNA, U4 small nuclear 65, pseudogene, humanhuman

BASIC

Gene RNU4-65P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-65P-201ENST00000410473 CHIC1Q5VXU3 224 aa14.33□□□□□ -0.12
RNU4-65P-201ENST00000410473 AEBP2Q6ZN18 517 aaPredicted RBP14.31□□□□□ -0.12
RNU4-65P-201ENST00000410473 PHF23Q9BUL5 403 aaPredicted RBP12.67□□□□□ -0.38
RNU4-65P-201ENST00000410473 SENP3Q9H4L4 574 aaPredicted RBP12.03□□□□□ -0.48
RNU4-65P-201ENST00000410473 PLPPR3Q6T4P5 718 aa11.77□□□□□ -0.53
RNU4-65P-201ENST00000410473 FOXD1Q16676 465 aa11.14□□□□□ -0.63
RNU4-65P-201ENST00000410473 ADRA2BP18089 450 aa11.07□□□□□ -0.64
RNU4-65P-201ENST00000410473 PPP6R1Q9UPN7 881 aa11.05□□□□□ -0.64
RNU4-65P-201ENST00000410473 KCNA4P22459 653 aa10.67□□□□□ -0.7
RNU4-65P-201ENST00000410473 PIAS4Q8N2W9 510 aaPredicted RBP10.58□□□□□ -0.72
RNU4-65P-201ENST00000410473 PPP4R3CPQ6ZMV5 832 aa10.44□□□□□ -0.74
RNU4-65P-201ENST00000410473 EHMT2Q96KQ7 1210 aa10.35□□□□□ -0.75
RNU4-65P-201ENST00000410473 NCBP3Q53F19 620 aaKnown RBP10.23□□□□□ -0.77
RNU4-65P-201ENST00000410473 MSH5O43196 834 aa10.19□□□□□ -0.78
RNU4-65P-201ENST00000410473 SLC4A1APQ9BWU0 796 aaKnown RBP10.19□□□□□ -0.78
RNU4-65P-201ENST00000410473 NPM3O75607 178 aaKnown RBP10.15□□□□□ -0.78
RNU4-65P-201ENST00000410473 CSRNP3Q8WYN3 585 aa10.08□□□□□ -0.8
RNU4-65P-201ENST00000410473 CNKSR2Q8WXI2 1034 aa10.04□□□□□ -0.8
RNU4-65P-201ENST00000410473 SCAF1Q9H7N4 1312 aaKnown RBP10.02□□□□□ -0.81
RNU4-65P-201ENST00000410473 MAPK8IP2Q13387 824 aaPredicted RBP9.9□□□□□ -0.82
RNU4-65P-201ENST00000410473 ZBTB22O15209 634 aa9.85□□□□□ -0.83
RNU4-65P-201ENST00000410473 DNAJC5BQ9UF47 199 aa9.8□□□□□ -0.84
RNU4-65P-201ENST00000410473 RNF216Q9NWF9 866 aaPredicted RBP9.76□□□□□ -0.85
RNU4-65P-201ENST00000410473 FOXD4L1Q9NU39 408 aa9.68□□□□□ -0.86
RNU4-65P-201ENST00000410473 DMRT2Q9Y5R5 561 aa9.68□□□□□ -0.86
RNU4-65P-201ENST00000410473 HOXD11P31277 338 aaPredicted RBP9.64□□□□□ -0.87
RNU4-65P-201ENST00000410473 SLC4A2P04920 1241 aa9.5□□□□□ -0.89
RNU4-65P-201ENST00000410473 MYCNP04198 464 aaPredicted RBP9.34□□□□□ -0.91
RNU4-65P-201ENST00000410473 ATXN8OSP0DMR3 200 aa9.29□□□□□ -0.92
RNU4-65P-201ENST00000410473 DCAF8L1A6NGE4 600 aa9.19□□□□□ -0.94
RNU4-65P-201ENST00000410473 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.14□□□□□ -0.95
RNU4-65P-201ENST00000410473 ATF5Q9Y2D1 282 aaPredicted RBP9.1□□□□□ -0.95
RNU4-65P-201ENST00000410473 U3KPZ7 1027 aaPredicted RBP9.09□□□□□ -0.95
RNU4-65P-201ENST00000410473 FKBP8Q14318 412 aa9.06□□□□□ -0.96
RNU4-65P-201ENST00000410473 SAMD1Q6SPF0 538 aaPredicted RBP9.04□□□□□ -0.96
RNU4-65P-201ENST00000410473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.03□□□□□ -0.96
RNU4-65P-201ENST00000410473 HNRNPUL2Q1KMD3 747 aaKnown RBP9.03□□□□□ -0.96
RNU4-65P-201ENST00000410473 POTEDQ86YR6 584 aa9□□□□□ -0.97
RNU4-65P-201ENST00000410473 RTN4Q9NQC3 1192 aaKnown RBP8.96□□□□□ -0.98
RNU4-65P-201ENST00000410473 AMER1Q5JTC6 1135 aaPredicted RBP8.92□□□□□ -0.98
RNU4-65P-201ENST00000410473 ZNF219Q9P2Y4 722 aaPredicted RBP8.87□□□□□ -0.99
RNU4-65P-201ENST00000410473 APLP2Q06481 763 aa8.84□□□□□ -0.99
RNU4-65P-201ENST00000410473 MKRN4PQ13434 485 aaPredicted RBP8.74□□□□□ -1.01
RNU4-65P-201ENST00000410473 RNF39Q9H2S5 420 aa8.74□□□□□ -1.01
RNU4-65P-201ENST00000410473 SPINK5Q9NQ38 1064 aaPredicted RBP8.72□□□□□ -1.01
RNU4-65P-201ENST00000410473 SLC24A1O60721 1099 aa8.7□□□□□ -1.02
RNU4-65P-201ENST00000410473 SPDYE4A6NLX3 237 aa8.68□□□□□ -1.02
RNU4-65P-201ENST00000410473 TRHP20396 242 aaPredicted RBP8.67□□□□□ -1.02
RNU4-65P-201ENST00000410473 C1QBPQ07021 282 aaKnown RBP8.65□□□□□ -1.02
RNU4-65P-201ENST00000410473 PROM2Q8N271 834 aa8.64□□□□□ -1.03
RNU4-65P-201ENST00000410473 POLA2Q14181 598 aa8.63□□□□□ -1.03
RNU4-65P-201ENST00000410473 CAPN15O75808 1086 aa8.62□□□□□ -1.03
RNU4-65P-201ENST00000410473 FBLN2P98095 1184 aa8.62□□□□□ -1.03
RNU4-65P-201ENST00000410473 FBXO3Q9UK99 471 aa8.59□□□□□ -1.03
RNU4-65P-201ENST00000410473 ABCB7O75027 752 aa8.52□□□□□ -1.05
RNU4-65P-201ENST00000410473 VASPP50552 380 aaPredicted RBP8.51□□□□□ -1.05
RNU4-65P-201ENST00000410473 ZBTB12Q9Y330 459 aaPredicted RBP8.5□□□□□ -1.05
RNU4-65P-201ENST00000410473 IFNLR1Q8IU57 520 aaPredicted RBP8.44□□□□□ -1.06
RNU4-65P-201ENST00000410473 DSG3P32926 999 aa8.42□□□□□ -1.06
RNU4-65P-201ENST00000410473 CACNB1Q02641 598 aaPredicted RBP8.4□□□□□ -1.06
RNU4-65P-201ENST00000410473 OSCARQ8IYS5 282 aa8.35□□□□□ -1.07
RNU4-65P-201ENST00000410473 SSUH2Q9Y2M2 353 aa8.34□□□□□ -1.07
RNU4-65P-201ENST00000410473 ZNF692Q9BU19 519 aaPredicted RBP8.33□□□□□ -1.08
RNU4-65P-201ENST00000410473 SPDYE2BA6NHP3 402 aa8.32□□□□□ -1.08
RNU4-65P-201ENST00000410473 SPDYE6P0CI01 402 aa8.32□□□□□ -1.08
RNU4-65P-201ENST00000410473 SPDYE2Q495Y8 402 aa8.32□□□□□ -1.08
RNU4-65P-201ENST00000410473 PKD2Q13563 968 aa8.31□□□□□ -1.08
RNU4-65P-201ENST00000410473 PABPN1Q86U42 306 aaKnown RBP eCLIP8.26□□□□□ -1.09
RNU4-65P-201ENST00000410473 STAG3Q9UJ98 1225 aa8.26□□□□□ -1.09
RNU4-65P-201ENST00000410473 PLCB2Q00722 1185 aa8.25□□□□□ -1.09
RNU4-65P-201ENST00000410473 SPOCK2Q92563 424 aa8.24□□□□□ -1.09
RNU4-65P-201ENST00000410473 KLHL34Q8N239 644 aa8.22□□□□□ -1.09
RNU4-65P-201ENST00000410473 DCAF8L2P0C7V8 631 aa8.21□□□□□ -1.1
RNU4-65P-201ENST00000410473 PLCD3Q8N3E9 789 aa8.19□□□□□ -1.1
RNU4-65P-201ENST00000410473 ECM2O94769 699 aaPredicted RBP8.16□□□□□ -1.1
RNU4-65P-201ENST00000410473 MIER1Q8N108 512 aa8.16□□□□□ -1.1
RNU4-65P-201ENST00000410473 HAP1P54257 671 aaPredicted RBP8.11□□□□□ -1.11
RNU4-65P-201ENST00000410473 RGL2O15211 777 aa8.09□□□□□ -1.11
RNU4-65P-201ENST00000410473 NPM1P06748 294 aaKnown RBP eCLIP8.09□□□□□ -1.11
RNU4-65P-201ENST00000410473 BBXQ8WY36 941 aaPredicted RBP8.06□□□□□ -1.12
RNU4-65P-201ENST00000410473 ZBTB47Q9UFB7 747 aaPredicted RBP8.06□□□□□ -1.12
RNU4-65P-201ENST00000410473 PLEKHG5O94827 1062 aa8.04□□□□□ -1.12
RNU4-65P-201ENST00000410473 CIZ1Q9ULV3 898 aaPredicted RBP8.03□□□□□ -1.12
RNU4-65P-201ENST00000410473 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.01□□□□□ -1.13
RNU4-65P-201ENST00000410473 VSIG10Q8N0Z9 540 aa8□□□□□ -1.13
RNU4-65P-201ENST00000410473 PAXIP1Q6ZW49 1069 aaPredicted RBP7.99□□□□□ -1.13
RNU4-65P-201ENST00000410473 SPDYE1Q8NFV5 336 aaPredicted RBP7.98□□□□□ -1.13
RNU4-65P-201ENST00000410473 RBM42Q9BTD8 480 aaKnown RBP7.98□□□□□ -1.13
RNU4-65P-201ENST00000410473 NUBP1P53384 320 aa7.97□□□□□ -1.13
RNU4-65P-201ENST00000410473 TRIM41Q8WV44 630 aa7.97□□□□□ -1.13
RNU4-65P-201ENST00000410473 AKT1S1Q96B36 256 aa7.97□□□□□ -1.13
RNU4-65P-201ENST00000410473 CFAP44Q96MT7 982 aa7.96□□□□□ -1.14
RNU4-65P-201ENST00000410473 KDM2AQ9Y2K7 1162 aa7.95□□□□□ -1.14
RNU4-65P-201ENST00000410473 CHGAP10645 457 aaKnown RBP7.94□□□□□ -1.14
RNU4-65P-201ENST00000410473 RNF25Q96BH1 459 aaPredicted RBP7.94□□□□□ -1.14
RNU4-65P-201ENST00000410473 GSE1Q14687 1217 aa7.93□□□□□ -1.14
RNU4-65P-201ENST00000410473 CREBZFQ9NS37 354 aa7.93□□□□□ -1.14
RNU4-65P-201ENST00000410473 MNX1P50219 401 aaPredicted RBP7.91□□□□□ -1.14
RNU4-65P-201ENST00000410473 REM2Q8IYK8 340 aaPredicted RBP7.91□□□□□ -1.14
RNU4-65P-201ENST00000410473 HS6ST3Q8IZP7 471 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms