Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 AP000997.3-201ENST00000623333 2250 ntBASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AP4B1Q9Y6B7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 SLC29A4P1-201ENST00000398760 971 ntBASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 HLA-L-209ENST00000420110 1011 ntBASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 AC100791.3-201ENST00000617619 330 ntBASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
AP4B1Q9Y6B7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 TSPY6P-201ENST00000448518 926 ntBASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 AC104771.1-201ENST00000603335 964 ntBASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4B1Q9Y6B7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP4B1Q9Y6B7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
AP4B1Q9Y6B7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP4B1Q9Y6B7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP4B1Q9Y6B7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
AP4B1Q9Y6B7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.58■□□□□ 0.57
AP4B1Q9Y6B7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
AP4B1Q9Y6B7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.58■□□□□ 0.57
AP4B1Q9Y6B7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
AP4B1Q9Y6B7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP4B1Q9Y6B7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.58■□□□□ 0.57
AP4B1Q9Y6B7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
AP4B1Q9Y6B7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
AP4B1Q9Y6B7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP4B1Q9Y6B7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.58■□□□□ 0.56
AP4B1Q9Y6B7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
AP4B1Q9Y6B7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP4B1Q9Y6B7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP4B1Q9Y6B7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
AP4B1Q9Y6B7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.58■□□□□ 0.56
AP4B1Q9Y6B7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
AP4B1Q9Y6B7 MKRN4P-201ENST00000444706 1521 ntBASIC18.58■□□□□ 0.56
AP4B1Q9Y6B7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.58■□□□□ 0.56
AP4B1Q9Y6B7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP4B1Q9Y6B7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP4B1Q9Y6B7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms