Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PCDHB9Q9Y5E1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PCDHB9Q9Y5E1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB9Q9Y5E1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHB9Q9Y5E1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB9Q9Y5E1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB9Q9Y5E1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 KRT18P16-201ENST00000510337 1294 ntBASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 MIR6786-201ENST00000616843 113 ntBASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB9Q9Y5E1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 TUBB8P6-201ENST00000436895 1288 ntBASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB9Q9Y5E1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 FAM197Y1-201ENST00000421178 764 ntBASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 AC125437.2-201ENST00000625180 2167 ntBASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHB9Q9Y5E1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHB9Q9Y5E1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB9Q9Y5E1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB9Q9Y5E1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB9Q9Y5E1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PCDHB9Q9Y5E1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PCDHB9Q9Y5E1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB9Q9Y5E1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.71■□□□□ 0.75
PCDHB9Q9Y5E1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDHB9Q9Y5E1 AC145285.6-201ENST00000604632 637 ntBASIC19.71■□□□□ 0.75
PCDHB9Q9Y5E1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB9Q9Y5E1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHB9Q9Y5E1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB9Q9Y5E1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PCDHB9Q9Y5E1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB9Q9Y5E1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB9Q9Y5E1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB9Q9Y5E1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB9Q9Y5E1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB9Q9Y5E1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms