Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDHGB4Q9UN71 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 AC018470.1-201ENST00000624790 3129 ntBASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 MIR935-201ENST00000401179 91 ntBASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 AL162430.1-201ENST00000480705 870 ntBASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB4Q9UN71 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 AL355472.2-201ENST00000422958 438 ntBASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 AC104581.1-202ENST00000635932 2618 ntBASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB4Q9UN71 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 AP001271.2-201ENST00000624018 1556 ntBASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 AC010980.2-201ENST00000587099 1412 ntBASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB4Q9UN71 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.77■□□□□ 0.59
PCDHGB4Q9UN71 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.77■□□□□ 0.59
PCDHGB4Q9UN71 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.77■□□□□ 0.59
PCDHGB4Q9UN71 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGB4Q9UN71 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.77■□□□□ 0.59
PCDHGB4Q9UN71 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
PCDHGB4Q9UN71 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGB4Q9UN71 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms