Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
THUMPD1Q9NXG2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.26■□□□□ 0.51
THUMPD1Q9NXG2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD1Q9NXG2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
THUMPD1Q9NXG2 AL121832.2-201ENST00000610979 668 ntBASIC18.26■□□□□ 0.51
THUMPD1Q9NXG2 AC092118.2-201ENST00000613495 667 ntBASIC18.26■□□□□ 0.51
THUMPD1Q9NXG2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD1Q9NXG2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD1Q9NXG2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD1Q9NXG2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
THUMPD1Q9NXG2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD1Q9NXG2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
THUMPD1Q9NXG2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.26■□□□□ 0.51
THUMPD1Q9NXG2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD1Q9NXG2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
THUMPD1Q9NXG2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 MIPEPP3-201ENST00000412105 444 ntBASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
THUMPD1Q9NXG2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
THUMPD1Q9NXG2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD1Q9NXG2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD1Q9NXG2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
THUMPD1Q9NXG2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
THUMPD1Q9NXG2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.23■□□□□ 0.51
THUMPD1Q9NXG2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD1Q9NXG2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD1Q9NXG2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD1Q9NXG2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.23■□□□□ 0.51
THUMPD1Q9NXG2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD1Q9NXG2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.23■□□□□ 0.51
THUMPD1Q9NXG2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.23■□□□□ 0.51
THUMPD1Q9NXG2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.23■□□□□ 0.51
THUMPD1Q9NXG2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD1Q9NXG2 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.23■□□□□ 0.51
THUMPD1Q9NXG2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.23■□□□□ 0.51
THUMPD1Q9NXG2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.23■□□□□ 0.51
THUMPD1Q9NXG2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD1Q9NXG2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 DUSP5P2-201ENST00000426873 1033 ntBASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 CROCCP5-201ENST00000436658 830 ntBASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 AC006970.2-201ENST00000450065 779 ntBASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 AC083906.2-201ENST00000511578 360 ntBASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms