Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC28.85■■■□□ 2.21
SCAF1Q9H7N4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC28.85■■■□□ 2.21
SCAF1Q9H7N4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
SCAF1Q9H7N4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SCAF1Q9H7N4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC28.85■■■□□ 2.21
SCAF1Q9H7N4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
SCAF1Q9H7N4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC28.85■■■□□ 2.21
SCAF1Q9H7N4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC28.85■■■□□ 2.21
SCAF1Q9H7N4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SCAF1Q9H7N4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SCAF1Q9H7N4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC28.85■■■□□ 2.21
SCAF1Q9H7N4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC28.85■■■□□ 2.21
SCAF1Q9H7N4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC28.85■■■□□ 2.21
SCAF1Q9H7N4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SCAF1Q9H7N4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC28.85■■■□□ 2.21
SCAF1Q9H7N4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
SCAF1Q9H7N4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC28.85■■■□□ 2.21
SCAF1Q9H7N4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC28.85■■■□□ 2.21
SCAF1Q9H7N4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SCAF1Q9H7N4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
SCAF1Q9H7N4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SCAF1Q9H7N4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SCAF1Q9H7N4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SCAF1Q9H7N4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SCAF1Q9H7N4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC28.83■■■□□ 2.21
SCAF1Q9H7N4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC28.83■■■□□ 2.21
SCAF1Q9H7N4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
SCAF1Q9H7N4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SCAF1Q9H7N4 DUSP5P1-201ENST00000441325 1139 ntBASIC28.83■■■□□ 2.21
SCAF1Q9H7N4 AC006011.2-201ENST00000621313 1158 ntBASIC28.83■■■□□ 2.21
SCAF1Q9H7N4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SCAF1Q9H7N4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SCAF1Q9H7N4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC28.83■■■□□ 2.21
SCAF1Q9H7N4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC28.82■■■□□ 2.2
SCAF1Q9H7N4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
SCAF1Q9H7N4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SCAF1Q9H7N4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
SCAF1Q9H7N4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC28.82■■■□□ 2.2
SCAF1Q9H7N4 AL450487.1-201ENST00000426799 995 ntBASIC28.82■■■□□ 2.2
SCAF1Q9H7N4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC28.82■■■□□ 2.2
SCAF1Q9H7N4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC28.82■■■□□ 2.2
SCAF1Q9H7N4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SCAF1Q9H7N4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
SCAF1Q9H7N4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SCAF1Q9H7N4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SCAF1Q9H7N4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC28.82■■■□□ 2.2
SCAF1Q9H7N4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
SCAF1Q9H7N4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC28.82■■■□□ 2.2
SCAF1Q9H7N4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
SCAF1Q9H7N4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC28.81■■■□□ 2.2
SCAF1Q9H7N4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
SCAF1Q9H7N4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC28.81■■■□□ 2.2
SCAF1Q9H7N4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
SCAF1Q9H7N4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SCAF1Q9H7N4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC28.81■■■□□ 2.2
SCAF1Q9H7N4 AC010203.1-204ENST00000548782 407 ntBASIC28.81■■■□□ 2.2
SCAF1Q9H7N4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC28.81■■■□□ 2.2
SCAF1Q9H7N4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC28.81■■■□□ 2.2
SCAF1Q9H7N4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SCAF1Q9H7N4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SCAF1Q9H7N4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SCAF1Q9H7N4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC28.81■■■□□ 2.2
SCAF1Q9H7N4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SCAF1Q9H7N4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SCAF1Q9H7N4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SCAF1Q9H7N4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SCAF1Q9H7N4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC28.8■■■□□ 2.2
SCAF1Q9H7N4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC28.8■■■□□ 2.2
SCAF1Q9H7N4 LIN28AP1-201ENST00000429574 405 ntBASIC28.8■■■□□ 2.2
SCAF1Q9H7N4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC28.8■■■□□ 2.2
SCAF1Q9H7N4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
SCAF1Q9H7N4 ATP5G1P1-201ENST00000448724 379 ntBASIC28.8■■■□□ 2.2
SCAF1Q9H7N4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SCAF1Q9H7N4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC28.8■■■□□ 2.2
SCAF1Q9H7N4 AC010947.1-201ENST00000623454 693 ntBASIC28.8■■■□□ 2.2
SCAF1Q9H7N4 AP003400.6-201ENST00000624698 740 ntBASIC28.8■■■□□ 2.2
SCAF1Q9H7N4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
SCAF1Q9H7N4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC28.8■■■□□ 2.2
SCAF1Q9H7N4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SCAF1Q9H7N4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms