Protein–RNA interactions for Protein: Q9H4I3

TRABD, TraB domain-containing protein, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABDQ9H4I3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.96■□□□□ 0.79
TRABDQ9H4I3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRABDQ9H4I3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 UNC93B5-201ENST00000530315 699 ntBASIC19.95■□□□□ 0.78
TRABDQ9H4I3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
TRABDQ9H4I3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 NEFHP1-201ENST00000412845 2629 ntBASIC19.94■□□□□ 0.78
TRABDQ9H4I3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 AC006557.6-201ENST00000623071 864 ntBASIC19.94■□□□□ 0.78
TRABDQ9H4I3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRABDQ9H4I3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 RNA5SP413-201ENST00000516373 109 ntBASIC19.93■□□□□ 0.78
TRABDQ9H4I3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TRABDQ9H4I3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms