Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC12.93□□□□□ -0.34
LITAFQ99732 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC12.93□□□□□ -0.34
LITAFQ99732 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC12.93□□□□□ -0.34
LITAFQ99732 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC12.93□□□□□ -0.34
LITAFQ99732 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
LITAFQ99732 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC12.93□□□□□ -0.34
LITAFQ99732 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.93□□□□□ -0.34
LITAFQ99732 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC12.93□□□□□ -0.34
LITAFQ99732 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC12.93□□□□□ -0.34
LITAFQ99732 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC12.93□□□□□ -0.34
LITAFQ99732 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC12.93□□□□□ -0.34
LITAFQ99732 LINC00896-202ENST00000609602 2128 ntBASIC12.93□□□□□ -0.34
LITAFQ99732 AC243732.1-201ENST00000612648 864 ntBASIC12.93□□□□□ -0.34
LITAFQ99732 FGF8-207ENST00000618991 856 ntTSL 3 BASIC12.93□□□□□ -0.34
LITAFQ99732 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LITAFQ99732 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC12.93□□□□□ -0.34
LITAFQ99732 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC12.93□□□□□ -0.34
LITAFQ99732 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC12.93□□□□□ -0.34
LITAFQ99732 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC12.93□□□□□ -0.34
LITAFQ99732 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LITAFQ99732 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LITAFQ99732 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
LITAFQ99732 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC12.92□□□□□ -0.34
LITAFQ99732 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC12.92□□□□□ -0.34
LITAFQ99732 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 PXK-206ENST00000463280 2825 ntTSL 2 BASIC12.92□□□□□ -0.34
LITAFQ99732 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
LITAFQ99732 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC12.92□□□□□ -0.34
LITAFQ99732 SLC7A5P2-201ENST00000553010 536 ntBASIC12.92□□□□□ -0.34
LITAFQ99732 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LITAFQ99732 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LITAFQ99732 MIR4767-201ENST00000582827 78 ntBASIC12.92□□□□□ -0.34
LITAFQ99732 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 ANO7L1-203ENST00000602586 1720 ntBASIC12.92□□□□□ -0.34
LITAFQ99732 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LITAFQ99732 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.92□□□□□ -0.34
LITAFQ99732 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 IRX1P1-201ENST00000438849 1838 ntBASIC12.92□□□□□ -0.34
LITAFQ99732 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LITAFQ99732 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LITAFQ99732 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC12.91□□□□□ -0.34
LITAFQ99732 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC12.91□□□□□ -0.34
LITAFQ99732 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LITAFQ99732 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC12.91□□□□□ -0.34
LITAFQ99732 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 KRT8P20-201ENST00000423953 1409 ntBASIC12.91□□□□□ -0.34
LITAFQ99732 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC12.91□□□□□ -0.34
LITAFQ99732 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
LITAFQ99732 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LITAFQ99732 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LITAFQ99732 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC12.91□□□□□ -0.34
LITAFQ99732 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC12.91□□□□□ -0.34
LITAFQ99732 TPRG1LP1-201ENST00000598702 760 ntBASIC12.91□□□□□ -0.34
LITAFQ99732 MIR4466-201ENST00000606121 54 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms