Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 AL020996.1-203ENST00000536896 2307 ntBASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 TUBB8P6-201ENST00000436895 1288 ntBASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 KRT18P6-201ENST00000555540 1265 ntBASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 AL161938.1-201ENST00000569833 2180 ntBASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 AC004408.2-201ENST00000623613 2777 ntBASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 AC141586.3-201ENST00000562166 1838 ntBASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB18PQ96TA0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 AC026366.1-201ENST00000488803 879 ntBASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB18PQ96TA0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB18PQ96TA0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
PCDHB18PQ96TA0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
PCDHB18PQ96TA0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB18PQ96TA0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
PCDHB18PQ96TA0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
PCDHB18PQ96TA0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PCDHB18PQ96TA0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB18PQ96TA0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB18PQ96TA0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB18PQ96TA0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PCDHB18PQ96TA0 MTDHP1-201ENST00000605323 784 ntBASIC20.58■□□□□ 0.89
PCDHB18PQ96TA0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB18PQ96TA0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHB18PQ96TA0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.58■□□□□ 0.88
PCDHB18PQ96TA0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHB18PQ96TA0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
PCDHB18PQ96TA0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
PCDHB18PQ96TA0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 AC069544.1-201ENST00000609399 999 ntBASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms