Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC090164.3-201ENST00000610780 2143 ntBASIC15.75■□□□□ 0.11
RAB40CQ96S21 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40CQ96S21 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40CQ96S21 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40CQ96S21 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40CQ96S21 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40CQ96S21 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.75■□□□□ 0.11
RAB40CQ96S21 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40CQ96S21 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40CQ96S21 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
RAB40CQ96S21 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.75■□□□□ 0.11
RAB40CQ96S21 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB40CQ96S21 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40CQ96S21 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB40CQ96S21 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40CQ96S21 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RAB40CQ96S21 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40CQ96S21 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB40CQ96S21 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40CQ96S21 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40CQ96S21 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.74■□□□□ 0.11
RAB40CQ96S21 AC104581.1-202ENST00000635932 2618 ntBASIC15.74■□□□□ 0.11
RAB40CQ96S21 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40CQ96S21 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40CQ96S21 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB40CQ96S21 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40CQ96S21 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB40CQ96S21 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB40CQ96S21 TERF1P2-201ENST00000583350 1212 ntBASIC15.74■□□□□ 0.11
RAB40CQ96S21 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40CQ96S21 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB40CQ96S21 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40CQ96S21 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB40CQ96S21 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40CQ96S21 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40CQ96S21 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40CQ96S21 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB40CQ96S21 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RAB40CQ96S21 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RAB40CQ96S21 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40CQ96S21 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40CQ96S21 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40CQ96S21 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40CQ96S21 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40CQ96S21 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB40CQ96S21 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB40CQ96S21 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40CQ96S21 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB40CQ96S21 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB40CQ96S21 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40CQ96S21 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40CQ96S21 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RAB40CQ96S21 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB40CQ96S21 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB40CQ96S21 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40CQ96S21 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40CQ96S21 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40CQ96S21 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RAB40CQ96S21 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RAB40CQ96S21 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40CQ96S21 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40CQ96S21 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40CQ96S21 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.73■□□□□ 0.11
RAB40CQ96S21 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RAB40CQ96S21 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
RAB40CQ96S21 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40CQ96S21 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40CQ96S21 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40CQ96S21 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40CQ96S21 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB40CQ96S21 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 Z98044.1-201ENST00000632503 1764 ntBASIC15.72■□□□□ 0.11
RAB40CQ96S21 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.72■□□□□ 0.11
RAB40CQ96S21 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB40CQ96S21 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB40CQ96S21 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB40CQ96S21 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB40CQ96S21 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RAB40CQ96S21 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB40CQ96S21 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB40CQ96S21 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB40CQ96S21 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB40CQ96S21 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB40CQ96S21 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.72■□□□□ 0.11
RAB40CQ96S21 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms